Phlebotomus papatasi: 129798951
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Entry
129798951 CDS
T10447
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ppap Phlebotomus papatasi
Pathway
ppap03020
RNA polymerase
ppap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129798951
09124 Replication and repair
03420 Nucleotide excision repair
129798951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppap03021
]
129798951
03400 DNA repair and recombination proteins [BR:
ppap03400
]
129798951
Enzymes [BR:
ppap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129798951
Transcription machinery [BR:
ppap03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129798951
DNA repair and recombination proteins [BR:
ppap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129798951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
129798951
NCBI-ProteinID:
XP_055698455
LinkDB
All DBs
Position
1:complement(36008391..36018767)
Genome browser
AA seq
1175 aa
AA seq
DB search
MFENDDEQYEEEDAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPAIDLQAEAQHTSGEIETPPRFLLKFDQIYLSKPTHWEKDGSPSPMMPNEARLRNLTY
SAPLYVDITKTKIVEGQDPIETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSLKDGKYAYKAEIRSCLEHSSRPTSTLWVNMM
ARGGQSIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVVQEQNVALNFIGARGARPGVTKEKRIKYAKEILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGNLLLKKTHTDMLKEREYNNYGWQVLVASG
VVEYIDTLEEETVMIAMSPYDLKQDKENAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSENKRIGDQEEQFEKPNRQTCQG
MRNALYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDGTTKRFRKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GITPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVE
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacgatgatgagcaatacgaggaggaagatgcggaggagatttcgcatgag
ttgtggcaggaagcctgctggattgttatcaacgcatacttcgatgaaaaaggtctcgtt
cggcagcaactcgacagctttgatgaattcattcagatgtctgtgcagcggattgtggag
gattccccagcaatagatcttcaagcggaggctcagcacacatccggagaaattgagact
ccgccgagatttctgctaaaattcgatcaaatttatttgtcgaaaccgacacactgggag
aaagatggatctcctagtccgatgatgccaaacgaggctcgtctccggaacctgacctat
tcagctccactctatgtggatattacaaaaacaaagatagttgaaggtcaggatcccatt
gagacgcagcaccaaaagacatttattggaaagattccaataatgttgcgatcaacttat
tgtttgctcagtcaattgacagatcgtgacttgactgaattgaatgagtgtccactggat
ccaggtggatatttcattattaacggatctgagaaggtcctgatagcacaggagaaaatg
gctacaaatacggtttacgtgtttagtttgaaggatggaaagtatgcctataaggcagaa
attagatcgtgtctagagcatagttctcggccgacttccactctttgggtgaatatgatg
gcccgaggtggtcagagtatcaaaaaatctgctatagggcagagaattattgccattctg
ccgtatatcaagcaagagattcccataatgattgtctttcgtgcattgggatttgtggct
gatcgggatattcttgagcatattatttacgattttgacgatcctgagatgatggaaatg
gtaaagccatctctggatgaggcctttgtggtgcaggagcagaatgtggctctgaatttt
attggggcaagaggtgcaaggcctggtgtgaccaaggagaagcgtataaagtacgctaag
gaaattttgcagaaagaaatgttgccccatgtgggagtttctgatttctgtgagaccaag
aaggcctacttcctgggttatatggttcatcggttgctcctggctgcactgggacgccgt
gaattggatgatcgtgatcactatgggaacaagcgtttggatcttgcaggtccactgctt
gctttcctcttccggggattatttaagaatctcatgaaggaagttcgaatgtatgctcag
aagtttattgatcgcgggaaagatttcaatttggagcttgccattaagacaaagatcatt
actgatggtttgaggtattccctggccacgggtaattggggtgatcagaagaaggcccat
caggcacgtgcaggagtgtctcaagtgttgaataggctcacctttgcctctaccctttcc
catttgcgtcgtgtaaattctcccattggaagagatggtaaactggccaaaccgcgtcag
ctccacaatacactctggggcatgatttgtccagcagaaactcccgaaggagctgctgta
ggattagtcaaaaatctcgccttgatggcctacatctccgttggatctcaaccttcgccg
atccttgagttcttggaggaatggtcaatggaaaatctcgaagagattgcaccatcggca
attgccgatgccacaaagatctttgtaaatggttgctgggtaggaatacatcgggatccg
gaacagttgatggcaactctgagaaaacttcgtcgacaaatggacattattgtgtcggaa
gtgtctatgattcgggatattagggatagagagattcgtatctataccgatgctggtcga
atctgtaggcccttgctgattgtggagaatgggaatcttctgctcaaaaagactcacacg
gatatgctaaaagagagggaatacaataactacggttggcaagtgttagtggctagtggc
gttgtggagtacattgatacgctcgaagaggagacagtgatgattgcaatgtcgccgtac
gatctcaaacaggataaagagaatgcctactgtactacttacactcactgtgaaattcat
ccggccatgattttgggagtttgtgcctctattattcccttcccggatcacaatcagagt
cccaggaacacctaccagagtgctatggggaaacaagccatgggtgtctacataacaaac
ttccacgtgagaatggacacacttgctcacgtgctttactatcccatgaaaccccttgta
accacaagatccatggagtatctgcgtttcagagaattgccagctggcattaattcaatt
gtagccattctctgctacactggctacaaccaagaagacagtgtcattctcaatgcttcg
gcagttgagagaggtttcttccgatctgttttctatcgctcctacaaggattccgagaac
aaacgtattggtgatcaggaggagcaatttgagaagccaaatagacaaacttgtcaaggc
atgagaaatgctctgtatgacaaattggatgatgatggaataattgcaccgggaataaga
gtatcaggagatgatgttgtaattgggaagacaataactctgcccgagaatgatgatgaa
ttggatgggacaacaaagagatttaggaagagagatgcgtcgacatttttgaggaattct
gagacgggaattgtggatcaggtgatgttgacactgaatagtgaaggatacaaattttgt
aagattcgtgtgagatctgtgagaattccacagattggagataaatttgcctcgaggcac
gggcagaagggtacttgtgggattcagtacagacaggaagatatgccgtttacgtgtgag
ggaattactcctgatattattatcaatcctcatgctattccctctcgtatgacaattggg
catttgattgagtgcttacaggggaaattggggtcaaataaaggtgaaattggtgatgct
acgccattcaatgatgctgtcaatgtgcagaagatctctacctttctgcaggagtacgga
tatcatttgcgtggaaatgaggttatgtacaatggacatacgggtaggaagatcaatgcc
caggttttcttggggccaacctactaccaacgtctgaagcacatggtggacgataagatt
cactctagagcccgaggaccggtgcagattctcgtgaggcagcccatggagggaagggct
cgcgatggaggattgcgttttggagagatggaacgtgattgtcaaattgcccatggggca
gctcaattcctcagggagaggctatttgaggtgtctgatccctataggattcacgtttgc
aacttttgcggattgattgccattgcaaatctccggaataatacctttgagtgcaaagga
tgcaaaaataagactcagatctctcaagttcggctcccatatgcagctaagttgctgttc
caggagctgatgtccatgaatattgctccgagattaatggtggagtag
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