Phlebotomus papatasi: 129799130
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Entry
129799130 CDS
T10447
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
ppap Phlebotomus papatasi
Pathway
ppap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129799130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppap03021
]
129799130
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129799130
Transcription machinery [BR:
ppap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129799130
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129799130
U7-dependent histone pre-mRNA processing factors
129799130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_EZ
HEAT
HEAT_2
TOR1L1_N
INTS7_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
129799130
NCBI-ProteinID:
XP_055698755
LinkDB
All DBs
Position
1:complement(108449717..108457543)
Genome browser
AA seq
1150 aa
AA seq
DB search
MSNLLPRTTFLASEETAALFTNEKTANDRSKVVEWLNEASLADKTTKCELLSKVQELTVN
SEADFLEEFIDNVLSYAQDPLADVKRAVVGFTEAVSKNHPQFIPKIVPILVLLLRDHSPQ
VQKRVIQAFAAIYRSALQWICTASETTDSMEQAWNVICNIKAQIVDMIDSDNDGIRTNAI
KFLEGVIILQTYPDEDSVKRDNDFSLEDVPMTLKIARKRKLEDEAINIFELLLKFHAASH
ISSVNLIACTGSLCTVAKMRPTLMNPVIEAIVKLNSNLPPTLTDSQVSSVRKHLKMQLIN
ILKQPSSYEMQSTIVQVLGDLGCSNQEIARALPKVDKHEQQRRAKRALESSLASAAKKAR
HEKEEGKRAEGGASERAMEVDVDELANQKVKCTKLNETGILEAIKSAELVVQLVVATMQH
LPGECPQYFLDTYTPILSMSQSQQMQKIAMGLAEQMTEKKCGPGMSAITKEPPMRPKVTL
EEERTIVQGLRQKEMIVDQPAPSEVAEVSRGEDDVQMRKDEATKKLREHLERTKGEQNLL
PKMKQRVRTLKLQEVTKPLSKQIKEQFLLEAVRRILDAERAALMGGAANRRRKILTVLAS
TFSPSVRDIILSFIYEDIREHLDLAFSWIYEEYSLLQGFTRHSYIKSEHKPDYAYNKLLC
DLIKHVAYHAEIRDKIWKVDVIRAFYLESPLLTDECIDILVMLCEMEYYTDAAITLTRDL
AVERPPKMDKFMKVLLRFVLHETPEIRGKAIEAVITLYAVHKMMVTQIEEFALTWLSHLE
KEAPPDVIFHLQYGRPEPISTWTDDLARICLNLFLALMPYHEKLIHNLCTVYTATSSDMK
RIILRSIEAPIRHIGPDSFELLNLVENCPKGAETLITRIIYILTEKNPPTPELVARVREL
YQNKVSDVRLLIPVMSGLTKKEILTSLPRFIKLNPVVVKEVFNRLLGLTADFHNAPLPVT
PTELLVALHTIDPAKVELKFIVKATSLCLAEKDTYTHEILAIVLQQLVEMVPLPTLLMRT
VIQSLTLYPRLAGFVTNILQRLILKQVWKQKVVWDGFLKCCQRLMPQSLPVLIQLPPHQL
QDALTQCPDLRTPLLDHVKTITEIGAVSQQVLDVLMGNLENKLAESGKESSAKDAPTSSE
PDQPLPPGED
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatttactgccgaggacaacttttctggcttctgaggaaaccgcagctcttttc
accaacgagaaaacagccaatgaccgttctaaggtcgttgagtggctcaatgaggcttct
ctggcggataaaaccaccaaatgtgagcttctgagcaaggtgcaggagctcacagtgaat
tccgaggcggattttctcgaggaattcattgacaatgtgctgtcgtatgcccaggatcct
ctggcggacgtgaagagggctgttgtgggattcactgaggctgtttcgaagaatcatcct
caatttatccccaaaattgttccaattctcgttcttttgctacgggatcactcaccccag
gtgcaaaagcgtgtcattcaggcttttgctgcaatttaccggagtgcccttcagtggatc
tgcacggcttctgagaccacggacagcatggaacaagcctggaatgtcatctgcaatatc
aaagcgcagattgtcgatatgattgacagtgacaacgatgggattcgcacgaatgctatc
aagttcctcgagggtgtcatcattctgcagacctatccggatgaggacagcgtgaagaga
gacaatgatttctccctggaagatgtcccaatgaccctgaagattgccaggaaacggaag
ctcgaggatgaagctataaacatctttgagctcctgctgaagttccatgcagcttctcat
atttcttctgtgaatcttatcgcctgcactggatccctgtgcacggtggccaaaatgcgt
ccgactctcatgaatcccgtaattgaggcaattgtcaagctcaattccaatctccctcca
actctcacggattcccaagtcagttctgtgcggaagcacttgaagatgcagctgataaat
attctgaagcagccgtcgtcgtatgagatgcaatcgacaattgttcaggttttgggtgat
ttgggctgcagcaatcaggagattgcaagagctctgcccaaagtggacaagcatgagcaa
cagaggagagccaagagagctctggaatccagcctggccagtgcggccaagaaggcgcgg
catgagaaggaggaagggaagcgagctgaaggaggagcgtctgagcgtgctatggaagtg
gatgtggatgaattggccaatcagaaggtgaaatgcacgaaattgaatgagacaggcatt
ttggaggcgataaagtctgccgaattggtggttcagttggtcgtggccacgatgcagcat
cttccgggtgaatgtccacagtacttcctggacacgtacacgccaattttgagcatgagc
cagagtcagcagatgcagaagattgcaatgggattggctgagcagatgacagagaagaaa
tgtggtccgggaatgagtgcgatcacgaaggagcctccaatgcgtcccaaggtgaccttg
gaagaggagaggacgattgtgcagggtttgaggcagaaggagatgattgtggatcaacca
gctccgtcggaagtggctgaagtatcccgtggggaggatgatgttcagatgcgcaaggat
gaggcaactaagaagctacgggaacatctcgagaggaccaaaggcgagcagaatttgctg
ccaaagatgaagcagagagtgaggacactgaaattgcaggaagtcacaaagcccctgtcg
aagcagatcaaggaacaattcctcttggaggccgtccggaggattctcgatgccgaacgg
gcagctctgatgggcggagctgccaatcgccgaaggaagatcctcacggttctcgcgtca
actttctctccgagtgtccgggacattatcctttcgttcatctacgaagacatccgggag
catctggatctggcattttcctggatctacgaagaatacagccttctccaaggattcaca
cggcattcgtacattaaatccgagcataagccagactatgcctacaacaaactcctgtgc
gatctcatcaaacacgtggcctaccacgctgagatccgggacaagatttggaaggtcgat
gtcatccgggcattctacttggaatccccactcctcacggatgaatgcattgacattctg
gtgatgctctgtgagatggaatactacacagatgccgccataactctgaccagggaccta
gctgttgagcgtccgccaaaaatggacaaattcatgaaggtcctcctcagatttgtcctg
cacgagactccggagattcgaggaaaggccatagaggctgttatcactctctatgccgtc
cacaaaatgatggtgacacaaattgaagaattcgccctgacatggctgagccatttggaa
aaggaagctcctccggatgtcatcttccatctgcagtacggccgacctgaacccatttcc
acgtggacggatgatttagccagaatctgcctcaatctcttcctagccctcatgccctac
cacgagaaactcattcacaatctctgcaccgtctacactgccacgagcagtgacatgaaa
cgcataatcctgcgttccattgaagctcccatccggcacattggtccggacagctttgaa
ctgctcaatctcgtggaaaactgtcccaaaggggcagaaactctaataacccgaatcatc
tacattctaacagagaagaatccaccaactccggaactcgtggcccgtgtcagggaactc
taccagaacaaagtttccgacgtgcgtctcctaatccccgtaatgtccggactgacaaag
aaagaaatcctaacctcacttccacgcttcatcaaactaaatcccgtcgtagtcaaggaa
gttttcaacagactcctcggtcttacagcagatttccacaatgctccactcccggtcacc
ccgacggaactcctagtggctctgcataccattgatccggccaaagtcgaactcaaattc
atcgtcaaagccacgagtctttgcctggccgagaaggacacatacactcatgaaatcctg
gcaattgtcctgcagcaactcgtggaaatggttcctctgccaactctcctcatgcgcaca
gtcatccaatccctaaccctctatccccgactggcaggattcgtcacgaacatcctccag
cgtctcatcctgaagcaagtctggaagcagaaggtcgtctgggatggttttctaaagtgc
tgccagagactaatgccccagagtcttccagtactcatccagctgcctccgcatcagctt
caagatgcactgacacagtgtcctgacctcaggactcctctgcttgaccacgtgaagacc
atcacggaaattggagcggtttctcagcaggttctcgatgttctgatgggaaatctcgag
aacaaacttgctgaaagcgggaaggaatcgtccgctaaggacgcccctacatcttcggag
cccgaccagcctctgcctcctggagaggactaa
DBGET
integrated database retrieval system