Phlebotomus papatasi: 129799745
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Entry
129799745 CDS
T10447
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
ppap Phlebotomus papatasi
Pathway
ppap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129799745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129799745
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129799745
U7-dependent histone pre-mRNA processing factors
129799745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
RRM_Rrp7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
129799745
NCBI-ProteinID:
XP_055699904
LinkDB
All DBs
Position
1:41080597..41082150
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AA seq
389 aa
AA seq
DB search
MGDKNSDQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGYG
FCEYKDQETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCDP
ENAPELITKTVASLPPEQMYELMKQMKTCIQNNPSEARQMLLLNPQLAYALLQAQVVMRI
VDPATAATMLFKPNQMPPVLTNQTVTQIQLQQQQQQLTVPHVPQPVPPVTMTRNDFAAPL
GQDIDLRSVDPRLTRSLDQDMRSLTQPLPVSDAFGPAPRPARQAAPTFPAADPRQRPIDP
RTNKVPPSVNVPVVTGVPAPTAPSAPAVAAAAARSGIPSGIPSDASDHEKAALIMQVLQL
SDEQIAMLPPEQRTSILVLKEQIAKSTQR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataagaattcagatcaaagtatcatggacaaatccatgcgatcggttttcgtt
gggaacatcccctacgaggccacggaggagaaattgaaggagattttcagcgaagtgggt
cctgtattgtctctcaagctggtgtttgaccgggagagtggcaagcccaaaggttatggc
ttctgtgagtacaaggatcaagaaacagccctgagtgccatgaggaatctcaatggctat
gaaatcggtggaagaaccctcagggtggacaatgcttgtacggaaaaatccaggatggag
atgcagcagctgcttcaggggccacaagttgagaatccatatggagagccttgtgatccg
gaaaatgcccctgagcttattacaaagaccgtggcatctttgccaccggagcaaatgtac
gagctgatgaagcagatgaagacatgcattcagaacaatccatcggaagctcgtcagatg
ctcctgctgaatccccagctggcctatgctttgctccaggctcaagtggtcatgaggatt
gtggatccagccacggcagctacgatgctcttcaaacccaatcagatgcctccagtgctc
acgaatcagacggtgacgcagattcagttgcagcagcagcagcagcaactgaccgtgcca
catgtaccgcagcctgtaccacccgtgaccatgaccagaaatgattttgctgcccctctc
ggccaagacatcgatttgcgttcagtagatcctcgattgacgcgctccctggaccaggac
atgcgttccctgactcagcctctgcctgtgtccgatgcatttggtccggctccgaggcct
gctcgccaagcggctcccacattcccagctgctgatccacgtcaacgtcccattgatccg
cgcaccaataaagtgcccccttcagtcaatgtccccgtggtcactggagttccggctccg
actgcaccctcggcccctgctgtggccgctgctgcagctcggagtggcattccgtcgggt
attccgagtgatgccagcgatcacgaaaaggcagcattgattatgcaggtgctgcagctg
tcggatgagcagatagcaatgctgccgccagagcagagaaccagcatcctggtgctcaag
gaacaaattgccaagagcactcaacgctga
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