Phlebotomus papatasi: 129800031
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Entry
129800031 CDS
T10447
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
ppap Phlebotomus papatasi
Pathway
ppap03013
Nucleocytoplasmic transport
ppap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129800031
09122 Translation
03013 Nucleocytoplasmic transport
129800031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129800031
03041 Spliceosome [BR:
ppap03041
]
129800031
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129800031
Spliceosome [BR:
ppap03041
]
Complex C
Other components
EJC/TREX
129800031
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129800031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
TMEM215
Motif
Other DBs
NCBI-GeneID:
129800031
NCBI-ProteinID:
XP_055700361
LinkDB
All DBs
Position
1:11430844..11460942
Genome browser
AA seq
1413 aa
AA seq
DB search
MASSGDIFKQTNWERSGKNEFLRQCKKALKDTQSPLFAKSSDRKSSISHAVYELLAHGVR
GQLRKDSVLSALTELAYLHSDMPSIILDVIGVLDAETSASAGDSSQEERQQFCNIVKATE
KFLSEKLLKERLEIDTLQEVGTVKNRNFYTKFIKVKTKLYYKQRRFNLFREESEGYAKLI
TELNKEISDTTTVQSMLEIIKSLIGCFNSDPNRVLDIILESFETRPDQDRLFVPLLQAYM
PDGQIICEVLGYKYSHYADIGTPASLYKVTAILLQNSVISLDEIYSWLSPSDKTIIADWE
TEMTNAKEFVRKLNIVSTNKDKEPENEPEKDVPQDKYSNNQKFGLCEALLRVGDWITAQQ
LIKKLPEQSTIVHEPIARALCNLIHSIIEPVYGAKCAKGYIRRKPTPGHPSRLAPPQVTT
FQKLRVHAFPMFIALGPSLHYDPVLLYKLVRLMKAILQDANVDASQPPASGSDTELLYHD
ILSLLDAAVLPALSYLDCNCCVAEEIWTVVKFFPYQYRFSLYGRWKNETYLTQPRLIQKR
GAAQKQIKALMKRVSKENIKPVGRLIGKLSHCSPGFLFDYILLQIQIYDNLIGPVVDSLK
YLTSLSYDVLGYCLVEALAQADRDRFKHDGTSLSMWLQSLASFCGAIYKKYNIELSGLLQ
YVANQLKAHKSLDLLILKEVVQKMAGIEAAEEMTNDQLSAMCGGEQLRGEAGYFSQVRNT
KKSSQRLKEALASNDLSVALCLLMAQQKHCVIYRETAHSHLKLVGKLYDQCQDTLVQFGT
FLGSTYTVEEYMERLPSIHSMLQEYHIHSDVAFFLARPMFSHQINQKYDQLRKADPNSKK
LTTSQKLSKYLEATASVMVPIVESVRPLHPPKVWEDVSPQFLVTFWSLSMYDLQVPAESY
LKEIAKLKQMSSQVMESKEMNASKGKKEQERYLALIDKLQDERKKQQEHVDKILHRLSQE
KDSWFLSRSVKTAKNETITQFLQLCLFPRCTFTALDAIFCAKFVHTIHSLKTANFSTLLC
YDRIFCDITNSVTSCTENEATRYGRFLCAMLETVMRWHADQAVFNKECANFPGFVTKFRV
SNQFSEANDHVGYENYRHLCHKWHYKITKAMVFCLDSKDYMQIRNSLIILMKILPHFPVL
TKLSQIIEKKVEKVKDEEKNQRQDLYILAASYIGQLKAKASQMIRESDFHQVKEAAAEKV
VNGDTKAEKKEVKERVEKSSSKSSSAAKTSSTQPAPTPAAEKVEKEKESTPAERVKKESS
TRESSNRTQGTKEKTPKEIRKEERQREKREEAKSRKRDKEKRRERKAASPAYYDVPVERY
YAIDHYDHERERDRDRDLSSVSNSSNGSTHRRSQEPPEQESRGRRGPEYSGASPDDEYFH
VTDSKRRKMDVSSRNRLWDILAIRITHSDRCQN
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaagtggagatatttttaaacaaacaaattgggaaagaagtggaaaaaatgaa
ttcttgagacaatgcaagaaggcattgaaggatacccagagtccactctttgccaaatcc
tccgatcgcaaatccagcatttcacacgctgtctacgagctcctggcccatggagtccgc
ggacaactccgtaaggactctgtcctttcggctctcactgagcttgcttaccttcactcg
gacatgccgtcgataatcctggatgtgattggagttctggatgcagagaccagtgccagc
gctggagattcatcccaggaggagcgccagcagttctgcaacatcgtcaaggccacggag
aagttcctctcggagaagctgctgaaggagcgcctggagattgatacgctgcaggaagtg
ggcacagtgaagaacaggaacttctacacaaagttcatcaaggtcaagaccaagctatac
tacaaacagcgtaggttcaatttgttccgcgaggaaagtgaggggtatgccaagttgatc
acagagctgaacaaagagatttcagacacaacaacagttcagagtatgcttgagataata
aaatcactgattggatgcttcaattccgatccaaatcgcgttcttgacatcattctggag
tcctttgagacacgtccagatcaggataggctattcgttccccttctgcaggcctacatg
cccgatggccagatcatctgcgaagtgttaggctacaaatacagccactatgctgatatt
ggaacaccggcatctctgtacaaagtcacagcgattctgctgcagaacagtgtgatatcg
cttgatgagatttattcttggttgagcccttcggacaagacgatcattgcagattgggag
acagagatgaccaatgccaaagaatttgtgcgaaagctgaatattgtgtcgacgaataag
gacaaggagccggagaatgagccggagaaggatgtgcctcaggataaatattccaataat
cagaaatttggtttgtgtgaggctttgctaagggttggagattggataacggctcagcag
ttgattaagaaattgcctgaacaatcgactattgtccatgagccgattgccagagccctc
tgcaatctcatccattcgatcattgagccagtgtatggggctaagtgtgccaagggttac
atcaggaggaagccaactccggggcatcccagtcgtctggctccaccgcaagtgacaacg
tttcagaagttacgtgtccatgcctttcccatgttcatagcccttggtccctcgctccac
tacgatcctgtgctcctgtacaaactcgtgcgtctcatgaaggcaatcctgcaagatgcc
aatgttgacgcatctcagccaccggcttcagggagtgatactgaacttctctatcatgat
atcctcagccttctcgatgcagcagttctgccggctctgtcctacttggactgcaattgc
tgcgtggctgaggagatctggaccgttgtgaagttcttcccgtatcagtatcgcttcagt
ttgtacggaaggtggaagaatgagacgtacctgacgcagccgaggctcattcagaagcgc
ggagctgctcagaagcagattaaggccctgatgaagagggtcagcaaggagaacatcaaa
ccagttggacgtctgattgggaagctgagtcactgctcgcctggtttcctctttgactat
atcctcctgcaaatccagatctatgacaatctcattggacctgttgtggattccctcaaa
tatctgacgtccctttcctacgacgtcctgggctactgcctggtggaggctctggcccag
gcggatcgggatcgtttcaagcacgacggaacatccctgtccatgtggctgcagagcctg
gccagcttctgcggtgccatttacaagaagtacaacatcgagctgagtggtttgctgcag
tacgtggcgaatcagttgaaggctcacaagagcctggatctgctgatcctcaaggaagtg
gtgcagaagatggcagggattgaggcggctgaggagatgacaaatgatcagctgagtgcc
atgtgtggcggggaacagttgcgcggggaggcgggatacttcagtcaggtgcggaatacg
aagaagtcgtcgcagagactgaaggaggcactggccagcaatgatctgtccgtggctctg
tgtctgctgatggcacagcagaagcactgcgtcatctaccgggaaacagctcacagtcac
ttgaagctggtggggaagttgtatgatcagtgccaggatactctggtgcagtttgggaca
ttcctcgggtccacgtacaccgtggaggagtacatggagcgtctaccatccattcacagc
atgctccaggaataccatattcactccgatgtggccttcttcctggctcgtcccatgttt
tcccatcaaattaatcaaaagtacgatcagttgagaaaagctgatcctaactccaagaaa
ctcaccacgtcgcagaaattgagcaagtatctggaggccacggcgtccgtgatggtgccg
attgtggagtctgtacgccctctgcatccgcccaaagtctgggaggatgtcagtccgcag
tttctggtgaccttctggtccctcagcatgtacgatttgcaggtcccggctgaaagttac
ctgaaggaaattgccaagttgaagcagatgtcgagtcaagtgatggagtccaaggagatg
aatgcttcgaaagggaagaaggaacaggagagatatttggcactcattgataagttgcag
gatgagaggaagaagcagcaggagcatgtggataaaatcctgcatcgtctgtcacaggag
aaggattcctggtttttgtcgaggagcgtcaagacggcaaagaatgagacgataacgcaa
tttctgcagctctgcctctttccacgatgcaccttcacggcgctcgatgccatcttctgt
gctaaatttgttcacaccattcacagtctcaaaactgccaacttctccaccttactctgc
tacgataggatcttctgtgacatcacgaactcggtgacttcttgcacggagaatgaggca
acgcgctatgggagatttctctgtgcaatgctagagacggtgatgcgttggcatgcagat
caggcggtttttaacaaggaatgcgccaattttcctggctttgtcaccaaattccgggtc
agcaatcagttttctgaggcaaatgatcatgttggctatgagaattatcgacatttgtgt
cacaagtggcactacaaaattaccaaagccatggttttctgcctggattccaaggattac
atgcaaatccgcaattcactgataatcctcatgaaaatccttccacactttcctgtgctc
accaaattgtctcagatcattgagaagaaggtggaaaaggtgaaggatgaggagaagaat
caaagacaggatctctacattctggctgccagttacattgggcagctcaaggcgaaagcc
agtcagatgatcagggagagtgatttccatcaggtcaaagaggcagccgcagagaaggtt
gttaatggagatacaaaagctgagaaaaaggaggtgaaggagcgcgttgagaagagtagc
agcaaatcgtcatcggctgctaagacttcatcaactcagccggcaccgacgccggcggct
gagaaggtggagaaggagaaggaatcgacgccggcggagagagtgaagaaggaatcgtca
acgagggagagttcaaataggacacaggggacgaaggagaagacacccaaggagatcagg
aaggaggagaggcagagggagaagagggaagaggccaagagccggaagagggataaggag
aagaggagagagaggaaggcagcatcgccggcgtactatgatgttcccgtggagagatat
tatgccattgatcactatgatcatgagagggaacgtgatagggatcgtgatctcagttca
gtgtccaattctagcaatggatcgacgcacaggaggagtcaggagccgccagagcaagag
agtagaggtaggaggggtccggaatattcgggtgcgtcgccagatgatgagtattttcac
gttacagactccaaaaggcgtaaaatggacgtgagctcgaggaaccgtttgtgggatatt
ttggccatacggatcacccattcggacagatgtcaaaattag
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