Phlebotomus papatasi: 129800054
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Entry
129800054 CDS
T10447
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ppap Phlebotomus papatasi
Pathway
ppap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129800054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129800054
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129800054
mRNA degradation factors
5'-3' decay
Decapping complex
129800054
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TraY
Motif
Other DBs
NCBI-GeneID:
129800054
NCBI-ProteinID:
XP_055700398
LinkDB
All DBs
Position
1:complement(13738478..13760702)
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AA seq
821 aa
AA seq
DB search
MADSFFGFDISLPPDDDLGGCLDDEELEYDALNDETFGSAINGDWEGIHENLVKLEDELK
KGDGASGKTPTRGQSTSRNKYGADLEINLSRMSLDDCFVENLDEPELPLKLDSSVWSSPV
DHRKREDPYNALSKDTSKAPKAQVLNNASPSPLKMFTVEDIERSIRKASRSSEALGAPLH
YAPEPPPPINCRPLMPPPGLLPSPMSQSHQGPPPPLFNPLQSMSKQPPPPFRPPGDFPPL
MHLMTSMGAPPMQRPMPPPVTMPQMPFNNLPMHTNFGGVRPMPGQPGRINPLLNGPPFPT
PPPVPQMQSNPSLSVNQYNKRLVQEIQQNHPMLHFNRLNNFDAGNNSYHQNQMNGNKNSN
HNHQQHRFKQQQQHQRDGNLNLEEYDEYANLMSQRNKQWLIGIQLLQLNTETPYIDDYYY
TVYKERRMKRERESKAHRDNQLNHPLTQPKGHAQLVLISMGKNGTNQRNHDRDKKNHQDS
GKGGGGGDKEMTPRTYTPLQFENSLGKLQCGSVTAPRKIIDMDIMGPDTGYQLNPSIELS
TQKKSRQMLLHIESLYKIVLKIEDLKDPIAIATAVVLKAKKEREKKQALEQLEAEGAAAG
EDEGGKSRQAALEAIDEKYPEPEKLEELLPQLVAGLSVDKVMGMMNVRKGKTLLKRSMPH
LVDEEHKWQVWQAIFAVLPIIAKKDRDDADGTLLGLFTEFKNHLIVAKLSDFITVPRAIL
AANKKLNYIFGNKFGMLSIIAMMLRVETIFQMDDNEPASNDGMAWRQFLVTLTACAAKQP
NAESEQSLDKEILQILLNHLRRFPEIESQPLTTVLSQVEFK
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggcagattcattttttgggttcgacatctcattgccgccggatgatgatctcgggggc
tgcttggatgacgaggagctggagtatgatgccttaaacgatgagaccttcggatcggca
atcaacggggactgggaggggattcatgagaatctcgtgaagctcgaggatgaactgaag
aagggcgatggggcgtccggaaagaccccaactcgaggtcagagcacttccaggaacaaa
tatggtgctgatttggaaatcaatctgtctcggatgtctctggacgattgcttcgtggag
aatctggatgagcctgaactgcccctgaagttggattcgagcgtgtggtcatcaccggtg
gatcacagaaagcgcgaggatccgtacaatgccttgtccaaggacacgtcgaaagcgcct
aaagcacaagtgctcaacaatgcatccccatcgcccctcaagatgttcacagtcgaggac
atcgagcgcagcatccgcaaggcatcccgatccagcgaagccctcggtgctccgctccac
tatgccccagagccaccgccgccaatcaactgccggcccctaatgccaccgccgggcctc
cttccgtcccccatgtctcagtcccatcagggaccgccgcctcccctcttcaatcccctt
cagtccatgtccaaacaacctccgcctcccttcaggccacccggcgacttcccgcccctc
atgcatctcatgacttccatgggcgccccgccgatgcagcgccccatgccgccgcccgtc
accatgccccagatgcccttcaacaacctccccatgcacacaaattttgggggcgtacga
ccgatgccgggtcagcctggcaggataaatccccttctcaatggtccgccgtttccaaca
ccgcctccggttccgcaaatgcaaagcaatccatccttaagtgtgaatcaatacaataag
agattagtgcaggaaattcaacagaatcatccgatgcttcacttcaatcgcttaaacaac
ttcgatgctggcaacaattcttatcatcagaaccaaatgaatggcaacaagaacagcaat
cacaatcaccagcagcatcgtttcaagcagcagcagcaacatcagagggatggaaatttg
aatttggaggagtacgatgaatatgcaaatttaatgagtcaacgaaataaacaatggctg
atagggatacaattgctgcagttgaacacagagacgccctacatcgatgactattactac
acggtgtacaaggaacggaggatgaagcgtgagcgtgagagtaaggctcatcgggacaat
cagttgaatcatccgttgacacagcccaagggtcatgctcagctggtgctgatatcgatg
gggaagaatgggacgaatcagaggaatcacgatagggacaagaagaatcatcaggattcg
gggaaagggggcggcgggggggacaaggagatgactccgaggacatatacaccgcttcag
tttgaaaatagcctggggaagcttcagtgtggaagtgtaacggcacccaggaagatcatt
gatatggacattatggggccggacacggggtatcagctgaatccgagcattgagctgtcc
acacagaagaaatcccgccagatgttgctgcacattgagtctctgtacaagattgtgctg
aagattgaggatctcaaggatcccattgccattgccacggccgtggtgctcaaggccaag
aaggagcgtgagaagaagcaggccctggagcaactggaggccgagggggcggcagcgggg
gaggatgagggaggaaagagtcgtcaggcggcactggaggcaattgatgagaaatatccg
gaaccggagaaactggaagagctcctgccgcagctcgtggcgggtctgagtgtggacaaa
gtgatgggaatgatgaatgtgaggaaggggaagacactactgaagcgttcgatgccccat
ctggtggacgaagagcacaagtggcaagtgtggcaggcaatcttcgcggtccttcccatt
atcgccaaaaaggacagggacgatgcagatgggacgctcctggggctcttcacggagttc
aaaaatcatctgattgtggcgaaattgagtgacttcatcacagttccaagggccattctg
gcggctaacaagaaacttaattatatttttggaaataagtttggtatgctgtcgataatt
gcgatgatgcttagggtggagacgatatttcaaatggatgataatgagccagccagcaat
gatgggatggcctggaggcaattcctggtgacgctgactgcgtgcgctgccaagcagcca
aatgcagaatccgagcagagtttagacaaagaaattttacaaattctactcaatcatctg
aggagatttcccgaaattgaatcacagccactgacaacagttctatcgcaggttgaattt
aagtaa
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