Phlebotomus papatasi: 129800063
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Entry
129800063 CDS
T10447
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
ppap Phlebotomus papatasi
Pathway
ppap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129800063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129800063
Enzymes [BR:
ppap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
129800063
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129800063
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129800063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_14
LRR_8
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LRR_R13L1-DRL21
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
129800063
NCBI-ProteinID:
XP_055700412
LinkDB
All DBs
Position
1:complement(13976452..14189445)
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AA seq
547 aa
AA seq
DB search
MSRNKDKYENNNPRRQTVFLSPEDIAAGRKTNWQAVEITGNVRNLSPSLWQFEHLTALYL
NDNNLLRLPSDIGQLANLKTLDLSSNKLRSLPAELGDLIQLRELLLNHNFLRVLPYEIGK
LFHLHVLGLHGNPLGKDILSIYNEPNGTQKLLTFMLDNLTVSAGPPPQRPWIPLARPNRT
RPACIFTVMCYNVLCDKYATRQMYGYCQSWALGWEYRKKAILDEIRHYSADIISLQEVET
DQFYNFFKPELKNDGYEGIFSPKSRAKTMAENERKYVDGCAIFYRASRFSLIKEHLVEFN
QLAMANSEGSDNMLNRVMPKDNIGLAALLKVKESAWEGLTPEAAQLAQPILVCTAHIHWD
PEFCDVKLIQTMMLSNELKSILDEAGHSFRPGHKFDSNNVQLLLCGDFNSLPDSGVIEFL
SSGRVSMDHQDFKELGYKSCLQRLSGSDTPNEFTHSFKLASAYSEDIMPYTNYTFDFKGI
IDYIFYTRTGMTPLGLLGPVSADWLRENKVVGCPHPHIPSDHFPLLVELELWHTASSQTP
NGLIGRR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgaaacaaagataaatatgaaaacaataacccaaggaggcagactgtatttcta
tcacctgaagatattgcagcaggtcgaaagacaaattggcaggcggtcgagataacaggc
aatgtgcggaacttgagtccgtcactgtggcaatttgaacatctaacagccctctatctc
aatgacaacaatctcctccgcttgccatccgacattggacaattggccaatctcaagacc
ctcgatctgtccagcaataaattgagaagtttgccagctgaacttggggatctcattcaa
ttgagggaacttttattgaatcacaactttttgcgtgttttaccgtatgaaattggaaaa
ttgtttcatttacatgttttggggttgcatggaaacccactgggaaaagatattctgtcc
atttacaatgaaccaaatggaacacaaaagctacttacattcatgttggacaatctaaca
gtgagtgcaggacctccgcctcagcgtccatggattccattagctcgtcctaatcgtact
cgaccagcatgtatattcaccgtaatgtgctacaatgtactctgtgacaaatatgcgact
agacaaatgtatggctattgccagagttgggctctcggatgggagtatcggaaaaaggca
attttggatgagattcgccactattctgccgatattattagtctacaggaagtggagaca
gatcagttttacaatttcttcaagccagaactcaaaaatgatggctacgagggaattttc
tcgccaaaatctagagccaaaacgatggcagagaatgaaagaaaatacgtagatggatgt
gctattttctacagagcgtcgagattttcactgataaaagagcacctggtggaattcaat
cagttggcaatggcaaattccgaaggatcggataatatgctgaatcgtgtgatgccaaag
gacaacattggcctggcagcgttactcaaggtgaaggagtcagcgtgggaaggtctaacg
cctgaagctgcccaactagcccaaccaattctcgtttgtacggcccacattcattgggac
ccagaattctgtgatgtcaaactcattcagaccatgatgctcagcaatgagctgaaaagt
attctggatgaggcgggtcatagttttcggccgggtcacaaatttgatagcaacaatgtg
cagcttctgctatgtggagactttaattcgttaccggattcaggagtgatagaatttctg
agttcgggtcgggtgtccatggatcatcaggattttaaggagctgggttacaaatcatgc
ctgcaacgcctatccggtagtgatacaccaaatgaatttacgcattccttcaaattggcc
tcagcatacagtgaagacattatgccctataccaactacaccttcgactttaaaggtatt
attgactatatattttacacgagaacggggatgacgccattgggactgttgggacctgta
tcggcagattggttgcgtgaaaataaagttgtaggctgtccacatcctcacatcccatcg
gatcactttccgcttcttgtggagctggaattgtggcatacagctagttcacaaacacca
aatggcctcattggtcggaggtag
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