Phlebotomus papatasi: 129800635
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Entry
129800635 CDS
T10447
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
ppap Phlebotomus papatasi
Pathway
ppap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129800635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129800635
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129800635
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
129800635
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Paralog
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GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
129800635
NCBI-ProteinID:
XP_055701142
UniProt:
A0A1B0DPE1
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Position
2:105686669..105687856
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AA seq
297 aa
AA seq
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MAHVPLSVAEKTFIVHGVQEDFRTDGRTRRDYRPMEIESGIVSHTSGSARIRLANSDILV
GVKTEIDTPFADHHDEGKIEFFVDCSANATPEFEGKGGGDLALEIANALQKAYASPHAFD
LKSLCILEHHQCWKLYVDILILECGGNLFDTVSLAVKAALFNTKIPKVSAVQVDGGNIEL
ELSDDIHDCNRLSVARMPLLVTLCKIGDHSVVDPSAEEEECASAKLVVGVSYAESSDEGF
VTMLRTSGPGSFLHSTLKETIKLGVMAGECLNVELLKVLKHEEQLTKSSKEVFGFLK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcccatgtccctcttagtgttgctgagaaaacctttatcgtccatggagttcaggaa
gatttccggacagacggaaggactcgccgggattaccggccaatggaaattgaatcggga
atagtcagtcacacgagcggttcagcaaggatcagacttgcaaattctgacatcctggtg
ggagtgaagacagaaatagacactccatttgctgatcatcacgatgagggaaagattgag
ttctttgtggattgttctgccaatgcaactccggaatttgagggcaagggcggtggagat
ctagctctggaaattgcaaatgcccttcagaaggcctatgcctccccgcatgcctttgac
ctgaagagtttgtgcatcctggagcatcatcaatgctggaagctctatgtggatattctg
attctagagtgtggagggaatctcttcgatactgtctccttggctgtcaaagctgccctg
ttcaacacaaaaatcccgaaagtcagtgcagttcaagttgacggaggaaatattgaactg
gagctctctgatgacattcatgactgtaacaggctttctgtggccagaatgcctctcctg
gtgactctctgcaaaattggagatcactctgttgttgatccttcggcagaagaagaagaa
tgtgcctcagcaaagctcgtcgtgggagtttcttatgcagaatcctcagacgaaggattt
gtgacgatgctgaggacatcaggacctggttcttttctccattcaaccctcaaggaaaca
atcaaattaggcgtaatggctggtgaatgtctcaatgtggaactcctgaaagtccttaaa
cacgaagaacagctcacaaagtcatccaaagaagtttttggattcctcaaataa
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