Phlebotomus papatasi: 129801156
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Entry
129801156 CDS
T10447
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
ppap Phlebotomus papatasi
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppap03041
]
129801156
Enzymes [BR:
ppap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129801156
Spliceosome [BR:
ppap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129801156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
HA2_C
OB_NTP_bind
DEAD
R3H
WHD_HA2
Ank_2
Ank
YTH
AAA_19
RNA_hel_CTD
ResIII
AAA_22
Cas3-like_C_2
ATPase
nSTAND3
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
129801156
NCBI-ProteinID:
XP_055701904
LinkDB
All DBs
Position
2:complement(42640271..42654210)
Genome browser
AA seq
1288 aa
AA seq
DB search
MAHRRKKIPPNVTECFQIAIEVELNRFLMSDEEELSFPSTLTRENRAFIHEFVKTKGLTS
KSRGKAVRVLTVYKPKKNIARKQKCSFKFTETTRQACYKLLEALPVSEREIEEVKSRKKA
NSINRSQFNVSTLTNGYMVVPPQAQGNHVRQLRRQLPIFQMRSQILNTVSSHQVIVIVSE
TGSGKTTQVPQYLLEEATTRNEACRIVCTQPRRLAALSVADRVAFERGEQVGDTIGYQIR
LESKTSPSSNLIYCTNGILVRCLMGGHYQKVFAKITHVIVDEVHERDKHSDFLLISLKEA
LAVNPHLKVILMSATIDSQLFSQYFNNCPVINIPGRIYEVTNYYLEHVLHMTDYCKPQMD
RRIQYGAVSGAVGGESPVASKPIQEALDEETIKLINETLEMCWNNCDEENFQQFLYLVAG
ENVPVDFKHTETDMTALMIAAGRGMEEFVEILLQMGANPSITSLHGMKAIDWARRLGHGG
CATLLEMAVQNQDANPTEKISDEYTNMLLEVYQSTKSVYEEEIDHRLLLTLIQMIHMQKP
AGSILIFLPGYEAILKQNEMILDSINRCEMQSNIRTYMLHSNMKISDQKAVFERIPQGCR
KIILSTNIAETSITIDDVVYVIDCGKVKQTIFDPLCGTTGLETCWVSQACAKQRAGRAGR
VTEGICFKLYSHARYAIMDEFTIPELLRVPLTEICLSAKLIEPQKPIAEYLEKALQPPAA
VSVRRSVALLKTMGALDEQETITDLGIHLADLPIDAHLGKMVIYSILMKCVDPILTIVSA
LSVRDPFILPSGARDRARVLDVKEKFAEKSFSDHMILIRVFQKWLDTSARRKRAFCEENF
LSNGAMQTICGVRSQILGHLRANGLIKSKGKGNIHDLNQYSRHWAVVKACLVAGLYPNVS
VRDINNRSCKLRCENNEKVLPHPHSILGAKRPPESKVKIKTFPSDWVAFEEKVRVGSSAL
IRCNTVVTPVTVALFAGAIHISEEQNLIPVEPLESDSELENEEDLNGNEVIFHVDDNIDF
TLSDEAAYLLFHVRHKLNYLLLMLIQKPDSFHLTTNGPDGQIIASIVEILLAEETEYKFP
IPEGIGERPQAVPLDFSADVNYGIQEEPRSSKPIQWSLSDALKDLQVTNYKNDGLRRNKR
GNKKFVNPRDPVDLPNEREHNGPTKFFLIKAVSTEQVRHILDGKEWCFSSNVFQIFKRCL
KRSDVDVIVVFHVGAAQKFYCMGQVYQKHGQIGVRRIRDGCCNFKTVREMVKRQKVGPFL
WNDGEELSREIGEMFLDLLSQNSPQEKT
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatcggagaaagaaaatccctcctaacgttactgaatgcttccaaatagccatt
gaggtggagctcaatcgcttcctgatgagtgacgaggaagaattatccttccctagtacg
ctaacccgcgagaatcgagcttttattcatgagtttgttaaaaccaaaggtttaacctca
aagtccagagggaaggctgtgagggtgcttacggtatacaaacccaaaaagaatattgcc
aggaagcaaaagtgctcctttaagtttacagagaccacaaggcaggcatgctataagctg
ttggaagccttgccggtctccgagagggaaattgaagaagtaaaaagcagaaagaaagcc
aattccatcaatcggagtcaattcaatgtgagcaccctgacgaatgggtacatggttgtg
cccccgcaggctcaagggaatcacgtgaggcagctgaggagacagttgcccatctttcag
atgcgctcgcagatactgaacactgtgtcatctcatcaagttattgtgattgtcagtgag
actggatcaggaaagacaacacaagtgcctcagtatctcctcgaagaggccacgacacga
aatgaagcctgccgtatcgtctgcactcaaccgcgacgcttggcagctctgtccgttgcc
gatcgtgtggcttttgagcgtggtgaacaagttggggacacaataggctaccagattcgc
ttggagagcaagaccagtcccagttcgaatctcatctattgtacaaatggtattctggtg
aggtgtctaatgggtggacactaccagaaagtttttgctaaaatcacccatgtcattgtg
gatgaagtccacgagcgtgataaacactctgacttcctcttgatctcactcaaggaggca
ctggctgtgaatcctcacctcaaggttatcctcatgtctgccacaattgactcacaatta
ttttcccaatacttcaacaactgcccggtaatcaacatcccaggaaggatctatgaggtc
accaattactacctggagcatgtacttcacatgactgactactgtaaaccccaaatggac
aggaggattcaatacggagctgtttctggagcagttggaggtgaaagtccagttgcttca
aagcccattcaggaagctctggacgaggagaccattaaactaatcaatgagactctagaa
atgtgctggaataactgtgatgaggagaatttccagcagtttctgtatttagtggccgga
gagaatgttccggtggattttaagcatacagaaactgatatgacagctttgatgattgca
gctggtcgtggaatggaagaatttgtagagattctgttgcaaatgggagctaatcccagt
ataacgtctttgcatggtatgaaggccattgattgggccagaagattgggtcatggaggt
tgtgcaactttgttggagatggcagttcaaaatcaagatgccaatccaacggaaaagatt
agtgatgagtatacaaatatgctgttggaagtctatcagtcaacaaagtctgtatatgag
gaggaaattgatcacagactccttctcacattgattcagatgatccacatgcagaaacct
gcagggagtattttgatttttctaccaggctatgaggctattttgaagcaaaatgaaatg
attttggattctatcaatcgttgcgaaatgcaatcaaatattagaacctacatgttgcac
agcaatatgaagatcagcgatcaaaaggctgtctttgagagaattccccagggttgtagg
aaaatcattttgtctaccaatatcgctgagacttctatcacaattgatgatgttgtgtat
gtgattgattgtgggaaggtcaagcaaacgatctttgatcctctctgtggtacaacgggc
cttgaaacttgttgggtgtcacaggcttgtgccaagcagagagccggaagagctggaaga
gtcactgaaggtatctgtttcaaactctattcgcatgcaagatatgccatcatggacgaa
ttcacaattcctgaactcctgagggtgccactaactgaaatttgcctgagtgccaagcta
attgaaccccaaaagccaattgcagagtatttggagaaggcattgcagccaccggctgct
gtaagtgttcgaagaagtgtggcacttttgaagacaatgggagccctcgatgagcaggaa
accatcacggatttgggtattcatctggctgatttgcccatcgatgctcatttaggaaaa
atggtaatctacagtattttgatgaaatgcgtggatcccattctcacaattgtaagtgct
ctctctgtcagggacccatttatcttgccaagtggagctcgagatcgtgctcgagtcctt
gatgttaaagagaaatttgctgagaaatcattcagtgatcatatgatactgatcagggtc
ttccaaaagtggttagacacttcggccaggcgtaaaagggccttttgtgaggagaatttc
ctcagcaatggagccatgcagacaatttgtggagtgagatcgcagattttgggacatttg
cgtgcaaatggattgataaagtccaaggggaaggggaatatccatgatctcaatcagtat
tcaaggcattgggctgtggtgaaggcttgcctagtggctggtctgtatcccaatgtatca
gtgagggatatcaataatcgatcttgtaaattgagatgtgaaaataatgagaaagtactg
ccacatccacatagcattctgggtgctaagaggccaccagagtccaaagtcaaaatcaag
actttcccatcggattgggtggcttttgaggaaaaggttcgggttggatcatcagcatta
attcgctgtaataccgttgtgactccagtgactgtggcactctttgcgggtgccattcac
atcagtgaggagcaaaatctcattcccgtggaacctctggaatccgactctgaattggag
aatgaggaggatttgaatggcaatgaggtgatttttcatgttgatgataacattgatttc
accctgtcagacgaagcggcttatttgttgtttcacgtgaggcacaaactgaattatttg
ctgctgatgcttatccagaaacctgattcttttcacctgaccaccaatggacccgatggc
caaatcattgcgtccattgtggaaattctactggcagaggagacagagtacaaatttccg
atacctgagggcattggggagagaccccaagcggttcccctggacttttcggctgatgtc
aattatggaattcaagaggaacctagatcttccaaacccatacagtggtctttgagtgat
gcccttaaagatctccaagtgactaattacaaaaatgacgggctgaggaggaataagaga
ggcaataagaagtttgtaaatccaagggatccagtagatctgccaaatgagagagaacat
aatggtccaaccaagttctttttgataaaagcagtttcaacggagcaagtcaggcatatt
ctcgatgggaaggaatggtgcttctcaagcaatgtctttcagatattcaaaagatgcctt
aagcgatccgatgtggatgtaatcgtggtatttcatgttggagctgcccaaaagttctac
tgcatgggtcaagtgtatcagaaacatggacaaattggagtacgaaggattcgtgatgga
tgctgcaacttcaagactgttagagaaatggtgaagcgtcaaaaagtgggtcctttcttg
tggaacgacggtgaagagctgtccagagaaattggtgaaatgtttcttgacttactcagc
cagaattcaccacaggagaagacataa
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