Phlebotomus papatasi: 129801831
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Entry
129801831 CDS
T10447
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ppap Phlebotomus papatasi
Pathway
ppap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129801831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129801831
03041 Spliceosome [BR:
ppap03041
]
129801831
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129801831
Spliceosome [BR:
ppap03041
]
Complex B
Other components
Prp19-related factors
129801831
Complex C
129801831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_2
Suf
TPR_8
TPR_12
TPR_15
TPR_10
Mad3_BUB1_I
ARM_TT21
RPN7
PPR
DHR-2_Lobe_A
ARM_TT21_C
SF3A3
Exo70_N
Motif
Other DBs
NCBI-GeneID:
129801831
NCBI-ProteinID:
XP_055703163
LinkDB
All DBs
Position
2:complement(56896960..56904896)
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AA seq
855 aa
AA seq
DB search
MTPTESLNIDIDVDEEDVPFEEEILRNAYSVKHWLRYIDHKKKAPRYGVNIVYERALKEL
PGSYKIWYNYLKTRRKQVRGRCITDPVYEEVNNAFERSLVFMHRMPRIWMDYCSFMTMQC
KITRTRQIFDRALRALPITQHHRIWPLYLDFLQRFNIPETAVRVYRRYLKLFPENAEEYI
EYLTSVDRLDEAAQQLASVVDMENFVSKHGKSNHQLWNELCELISKNPDKVHSLNVDAII
RGGLRRYTDQLGHLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFSQVFDAYAQFEE
LNLKKWMEEASESASGEDTDVNIEIRFARFEYLMERRLLLLNSVLLRQNPHNVPEWHKRV
KLFEGKPTEIIKTFTEAVQTVQPRLAVGKIHTLWVEFAKFYEANGQIDDARVVMEKATQV
DYVKVDDLASVWCEWAEMEIRQENFNGALGIMHRATAMPKKRAAYHDEKEPVQMRVYKSL
KVWSMYADLEESFGTYKSCKAVYDRIIDLRICTPQIIINFGMFLEEHNYFEEAFRAYEKG
IALFKWPYVFDIWNTYLTKFLQRYDGSKLERARDLFEQCLEFCPPEYAKCFYLLYAKLEE
EHGLARNAMAVYERGTSGVESSEQASMFNIYIKKAAEIYGLPRTRQIYEKAIEVLPEESA
REMCMRFAEMETKLGEVDRARAIYAHCSQMCDPRVTMDFWGAWKEFEVRHGNEDTMREML
RIRRSVQATYNTQVNMMAAQMTNSGVAGGTVADLAPGAKDGMRMLEAKAIEMNAEGVKSN
GLKAAASSNIMFVRGETQGLPGQGEKVVNPDEIDIGDESDEEEGDGEEVNIPIQQKSIPA
KVFGGLKKDDDEEEN
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgactccaactgaatccctaaatattgatatagatgttgatgaagaagatgttcctttc
gaagaagaaatcctgcggaatgcctattcagtgaagcattggcttagatacattgatcat
aaaaagaaggcaccgcgatatggggttaatattgtgtacgagagagcccttaaggaactc
cctggttcttacaaaatctggtacaattacctaaaaacccgccggaagcaagtgagagga
aggtgcataactgatcctgtatacgaagaagtcaataatgcctttgaaagatctttagtg
tttatgcacagaatgcccaggatctggatggattactgttccttcatgacaatgcagtgc
aaaattacacgtacaagacagatctttgatagggctctgagagcactccctattactcaa
caccatcgcatctggccactttatttggattttctgcaacgatttaacatccctgaaact
gcagtgcgcgtctataggcgataccttaagctattccctgagaatgctgaggaatatatt
gagtatctcactagtgttgataggctggacgaggcagctcaacagttggccagtgttgtt
gatatggaaaattttgtgtcgaaacatgggaaatccaatcatcaactgtggaatgaatta
tgtgagctcatcagtaagaatccggataaagtacattctctcaatgtcgatgcgatcatt
cggggtggtttgaggcggtacacagatcagttgggacatctctggaactctctggccgat
tactatgtgcgcagtggtctttttgaacgagcaagggacatctatgaagaagccatacag
acagtgacaacagtcagagacttttctcaggtctttgatgcctatgcccaatttgaggag
ttaaatctgaaaaagtggatggaagaggcttccgaaagtgcatctggtgaagataccgat
gtcaacattgaaatacgttttgcacgatttgaatatctaatggagaggcgtttgctactc
ctgaatagtgttctgttgcgccagaatccgcacaatgtgccagaatggcacaaacgcgtg
aaactctttgagggaaaacccacagaaatcatcaaaactttcacggaagccgtgcaaact
gtacaacctcgtttggcagtgggcaaaattcatacactttgggtagaatttgctaaattt
tacgaagccaatggccagattgacgatgcacgtgtggtaatggagaaagccacacaggtg
gattatgttaaagtggacgacttggcgtctgtatggtgcgaatgggctgagatggagatt
cgtcaggaaaatttcaatggagcccttgggattatgcacagggcaacagcgatgccgaaa
aaaagggcagcctaccacgatgaaaaggaacctgtgcagatgcgtgtatacaaatcactc
aaagtttggtcaatgtatgcagatttagaggagtctttcgggacatataagtcttgcaaa
gccgtctacgataggatcattgatctcaggatatgtacgccacaaatcataatcaatttc
ggaatgtttctagaggagcataattattttgaagaagctttcagagcatacgaaaaaggt
atcgcacttttcaagtggccttatgtgtttgatatatggaatacatatctgaccaaattt
cttcaacggtacgatggtagcaaactcgaaagagctcgcgatctttttgaacaatgcctg
gaattttgtccgccagaatatgcaaaatgtttctatttgctttacgctaagctcgaagag
gaacatggtcttgctagaaatgcgatggctgtgtacgagagaggtaccagtggagtagag
tcaagtgagcaagcgtcaatgttcaacatttatattaagaaagcagcagaaatttacgga
ttaccaagaacgagacagatatatgagaaggctattgaagtgttaccggaagagagtgcc
cgagagatgtgtatgcgatttgcggagatggaaacgaagttaggtgaagtggacagggca
cgtgcaatctatgcacattgcagtcagatgtgcgatccgcgtgtcacaatggacttttgg
ggagcttggaaagagtttgaagtacgccatggtaatgaggatactatgagggagatgctg
cgaatacgacggtcagtgcaggccacgtacaacacgcaggtgaacatgatggctgcccag
atgacgaattcaggggtagcggggggcacagttgcggatttggcaccaggtgcgaaagat
ggaatgcgaatgttagaagcaaaggccattgagatgaatgctgagggagtcaaaagcaat
ggactcaaggcagctgccagtagcaatatcatgtttgtgcgaggggaaactcagggactt
ccgggacagggtgaaaaggtggttaatcctgatgagatagatattggggatgaaagcgac
gaagaggaaggggatggtgaagaggtaaatattccaattcagcagaaatctatcccagcc
aaagtatttggggggctcaagaaggatgatgatgaagaagagaattga
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