Phlebotomus papatasi: 129801859
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Entry
129801859 CDS
T10447
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ppap Phlebotomus papatasi
Pathway
ppap03020
RNA polymerase
ppap03420
Nucleotide excision repair
Brite
Enzymes [BR:
ppap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129801859
Transcription machinery [BR:
ppap03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129801859
DNA repair and recombination proteins [BR:
ppap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129801859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129801859
NCBI-ProteinID:
XP_055703200
LinkDB
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Position
2:57190617..57203040
Genome browser
AA seq
1893 aa
AA seq
DB search
MSSGDSKAPVRTVKRVQFGILAPDEIRRMSCTEGGVQFPETMEGGRPKLGGLMDPRQGVI
DRNSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFFTKTIKTLRCVCFYCSKLLVSPNNPK
IKEIVMKSKGQPRKRLAYVYELCRGKTICEGGEDMDVGKENIQLPDANKKAGHGGCGHYQ
PAIKKTGLELIAEWKHVNEDSQEKKISVSAERVWEILKHITDEECFILGMDPKYARPDWM
IVTVLPVPPLSVRPAVVMFGAAKNQDDLTHKLADVIKANNELKKNESSGAAAHVIAENIK
MLQFHVATFVDNEIPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVRDNGERID
LRFHPKPSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKM
TKRDVFIEKEQMMNLLMWLPTWDGKMPQPCILKPKPLWSGKQLFSLIIPGNVNMIRTHST
HPDEEDDGPYKWISPGDTKVMVEHGDLIMGILCKKTLGTSAGSLLHICFLELGHDIAGRF
YGNIQTVVNNWLLLEGHSIGIGDTIADPQTYQEIQRAIRKAKEDVIGVIQKAHNMELEPT
PGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLPT
VKLSNKAFEKRFKFDPSNERYLRKIFNENVIKELTESGFVIQELESEWEQLSRDREMLRQ
IFPSGESKVVLPCNLQRMIWNVQKIFHINKRVPTDLSPLKVMQGVKELLQKCIIVAGNDK
ISKQANENATLLFQCLVRSTLCTKYVAEEFRLTGEAFDWLIGEIETRFQQAQVSPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKRPKAPSLTVFLTGGAA
RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQRTVIAEDQEFVNVYYEMPDFDPTRIS
PWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNADKLVLRIRIMNSDDNK
FQDNEEDTVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITETGE
FKAIGEWLLETDGTSMMKVLSERDVDPVRTYSNDICEIFQVLGIEAVRKSVEKEMNAVLQ
FYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAAAHAE
VDPMRGVSENIIMGQLPKMGTGCFDLLLDSDKCKLGVEIPTTMGPSMIGGTGMFFGAGAT
PSMSPPMTPWQQSATPGYGEWSPAGVSGMTPGGPSFSPSGASDVSGMSPSWSPNPGSPAS
PGITMSPYFAQSPGASSPCYSPSSPSYGATSPSAASSPNYSPTSPNYSPTSPMYSPTSPQ
YSPTSPNYNPASPNYSPTSPGFSPASPMYSPTNSNFASQQTGYSPGSPAYSMMSPYSPTS
PSYSPTSPAYSPTSPSYSPSSPGYSPTSPSYSPTSPSYSPSSPNYTPTTPSYSPSSPHFS
PTSPSYSPSSPKYSPTSPSYSPTSPSYSPASPSYGGSPQYTPGSPQYSPTSPKYSPTSPS
YSPSSPQHSPSSRYSPSSPNYSPTSPRYSPNISTYSPSSTKYSPTSPAFTPSSPASPTYS
PSSPAYSPTAPQGYSPTSPTYSPSSPAFEEQDD
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccggggactctaaggcacccgtgcggacggtaaaacgggtgcaatttggcatc
ctggcgccagatgaaattcgccggatgtcatgcaccgaaggtggagtacagttccccgag
actatggagggtggacgcccaaagttgggtggtttgatggatccccgacagggtgtaatt
gatagaaattcccgctgtcaaacctgcgctgggaacatgacagagtgtccgggacacttt
gggcatatagacctggccaagcctgtctttcacattggattcttcaccaagaccatcaaa
acgctgagatgcgtgtgtttttactgctcaaaattgctggtgagtccaaataatcccaaa
atcaaggagattgttatgaaatccaagggacagccaaggaagaggttggcttacgtgtat
gaattgtgtcggggtaagacaatttgtgaaggaggagaagatatggatgtggggaaggag
aatatacagttgccagatgccaataagaaggcaggacatggtggttgtggacactatcag
ccggccataaagaagacaggattggaattgattgctgagtggaagcatgtcaatgaagat
tcgcaggaaaagaagatttctgtgtcagctgagagagtttgggaaattctaaagcatatc
accgatgaggaatgttttattctgggcatggatcccaaatatgctcgtcctgattggatg
attgtcactgttttgccagttccaccactctcagttcgtccggctgttgtgatgtttgga
gctgctaagaatcaggatgatttaacgcataaacttgctgatgtcataaaggcaaacaat
gaactgaagaaaaatgaatcttcaggtgcagctgctcatgttattgctgaaaatatcaaa
atgctacaattccatgtggccacttttgtggacaatgaaattcctggaatgcccagagcc
atgcaaaagtccggaaagcccctaaaagccattaaggcgagattgaaggggaaagagggc
agaatcagaggaaatctcatggggaaacgtgtggatttctcagctagaactgtcatcaca
ccagatcccaatttgcgtatcgatcaggtgggagttccacgttccatcgcccagaatctc
acctttccggaacttgtgacacctttcaatatcgacaggatgcaagagttggtccgcagg
ggcaactcacagtatccaggggcaaagtacattgtcagggacaatggcgagaggattgat
ttacgtttccatccgaagcccagtgatctccatctgcagtgtggctacaaagtcgagagg
cacttgagggacgatgatttagtgattttcaatcgtcagccgacactccacaaaatgagt
atgatggggcatagggtaaaggtgcttccatggtcgacgttccggatgaatttgagttgc
acatctccttacaacgctgattttgacggagatgaaatgaatcttcacgtgccacaatca
atggaaactagagccgaggtggagaacattcacataacgccacgtcaaattatcacacca
caggctaataagcccgtaatgggcattgtccaggacactttgacggccgtccggaagatg
acaaagcgtgatgtatttattgagaaggaacaaatgatgaatcttctgatgtggctacca
acttgggatggaaaaatgccacagccatgtattctgaagcccaagccactttggtcaggg
aagcagctgttttctctgattattccgggcaatgtcaatatgatccgaacccattcaaca
catcccgatgaggaggatgatggtccatataaatggatttctcctggagataccaaagtc
atggtcgagcatggtgatctgattatggggattctgtgcaagaaaactctgggaacatca
gcaggatctctgttgcatatttgtttcttggaattgggtcatgatattgctgggagattt
tacggaaatatccagacagtggtgaataattggttgctcctggagggtcatagtattggt
attggtgacacaattgccgatccacagacctaccaagagattcagagggccatcaggaag
gccaaagaggatgtgataggggtgattcagaaggcgcacaatatggaattggaaccaact
cctggaaatactctgaggcagacttttgagaatcaagtgaatcgtatcctcaatgatgct
cgtgacaaaactggaggttcagctaagaaatccttgacagagtacaacaacttgaaggct
atggtggtgtcaggatcaaagggatcaaatatcaatatttcccaggttattgcctgtgta
ggtcagcaaaacgtagaaggaaagcgtattccatttggtttccgtaagagaacattgccg
catttcatcaaggatgattacggtccggagtctagaggattcgtggagaattcctatcta
gccggtcttactccatcggaattctactttcacgccatgggaggacgtgagggattgatt
gatacagctgtgaaaacagcagaaactggatatatccagcgacgtttgatcaaagctatg
gagtccgtgatggttcattatgatggcaccgtgaggaattccgtagggcaactcattcag
ttgagatacggtgaagacggactttgcggagaaactgtagaatttcagaatctcccaacg
gttaagttgtcaaacaaggcttttgaaaaacgcttcaaatttgatccgtcaaatgagaga
tacctgaggaagatcttcaatgagaatgtaatcaaagaattgactgaatctggttttgta
atccaagaattggaatccgaatgggagcaattgagtagggatcgtgagatgttgcgtcag
attttcccaagtggtgaaagtaaggttgtccttccgtgcaatttgcagcgaatgatttgg
aatgtccagaagattttccacattaacaaacgtgtaccaacggatttgagtccgttgaag
gtgatgcagggtgtgaaggaattgctgcagaagtgcataattgtggcgggaaatgataag
atatccaagcaggcaaatgaaaatgctacattgctgtttcaatgtttggtacgttcgaca
ctgtgtacaaagtacgttgcggaggaattccgattgactggtgaggcctttgattggttg
attggagagattgagacacgttttcagcaggctcaggtgagtcctggagaaatggtgggt
gctctggctgcacagtctttgggtgaaccagccactcaaatgaccctgaatactttccac
tttgctggagtatcttcgaaaaatgtgacacttggagtgcctcgtcttaaggagattatc
aatatctccaagcgtcccaaggcaccgtctttgacggtgtttctcacgggtggagctgcc
agggatgcagagaaagcgaaaaatgttctgtgccgtctggaacatacgactctgaggaag
gtgacggccaatacagccatctattatgatcctgatcctcagcgtacagtcattgcggag
gatcaggagtttgtcaatgtgtactatgagatgcctgattttgatccaacgcgcatctca
ccctggttgctgcgtattgaactggatcggaagcgtatgacggataagaaattgaccatg
gaacagattgctgagaaaattaatgctggctttggggatgatctcaattgtatcttcaat
gatgacaatgcagacaaactcgttctcagaattcgaattatgaatagcgatgacaacaag
ttccaggacaatgaagaggatactgtggataagatggaggatgatatgttcctgaggtgt
attgaggccaatatgttgtcggacatgacgctgcagggcattgaggcaatcgggaaagtg
tatatgcatctgcctcagacggacagtaagaagaggattgttatcacggaaactggagaa
tttaaagcaattggagagtggcttctggaaacagatggtacatccatgatgaaagtgctg
agtgagagggatgtagatccagtaagaacctacagcaacgacatctgcgagatcttccag
gtcctgggaattgaagctgtgcgaaagtcagtggagaaagaaatgaatgctgtgcttcag
ttctacggtctctacgtcaactatcgccatttggcgttgctttgtgacgttatgacggca
aagggtcatttgatggccatcactcgtcatggaatcaatcgtcaggacacaggagccctt
atgaggtgttccttcgaggagaccgtggacgttctgatggacgcagcagctcatgccgaa
gtggatcccatgcgtggagtctcagagaatattataatgggtcaattgccgaagatgggc
actggatgttttgatttgctcctggattcggataaatgcaaattgggcgtggagattcct
acgacaatgggaccttcgatgattggaggaactgggatgttctttggagctggtgctacg
ccaagtatgagtcctccaatgacaccttggcagcaatcagcgactccggggtatggagaa
tggtctccagctggagtgagtggaatgactcccggtggaccaagtttttcaccgtctgga
gcttcagatgtgagcggtatgtcaccgagttggtcaccaaatcctggatcaccagcatca
ccaggtatcacaatgtctccgtattttgctcagtcaccaggagcctcttcaccttgctac
tcaccatcgagtcccagctacggagctacatcaccaagtgcagcttcatcaccaaattat
tcacccacgagtcccaattattctcccacgagtcctatgtactcacccacgagtcctcag
tactccccaacgagtcccaattacaatccagcatcgccaaattattcaccaacaagtcca
ggattttcaccggctagtccaatgtattcaccgacaaatagcaattttgccagtcagcag
acgggatactcacctggaagtccggcatattcgatgatgagcccctattcgcccacgagt
ccgagttattcaccaacaagtccggcctattctcccacttctccttcatactccccatcg
agtcctgggtattcgcccacttctccgagttactcaccaacatcaccgagttactcacct
tcttcgccaaattacaccccaacaactccctcctattccccatcttcaccacatttttcc
ccaacttctcccagctactctccgtcatcgcccaagtactccccgacatctccttcatac
tccccaacttcgcccagctactctccggcgagcccttcctatgggggaagtccacagtac
acacctggatcaccacagtactccccaacatctcccaagtactcacctacatctccgagt
tactcaccatcctcgccacaacactccccaagcagcagatacagcccaagctcacccaat
tattcacccactagccctaggtactcacccaatatcagtacctattcgcccagcagcacc
aagtactctcccacgagtccggcatttacaccatcatcgccggcttcacccacttattcg
ccctcatcgccggcatactcgccgacagcaccacagggttactcaccaactagtcctacc
tactctcccagcagcccagccttcgaggagcaggatgactaa
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