Phlebotomus papatasi: 129802076
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Entry
129802076 CDS
T10447
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ppap Phlebotomus papatasi
Pathway
ppap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129802076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppap03021
]
129802076
Enzymes [BR:
ppap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129802076
Transcription machinery [BR:
ppap03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129802076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
129802076
NCBI-ProteinID:
XP_055703612
LinkDB
All DBs
Position
2:717778..728516
Genome browser
AA seq
1684 aa
AA seq
DB search
MIYFNRGGDSGTFHLDANELKFSAFTSDEVKKLSKVKIFTAQTIDRLGLALPGGLYDRRM
GPYDRDSDPCQTCGRAFVQCEGHLGHIELNMLVYNPIFIQTVYSVLRISCLSCFKLQLTD
HVRSLLELQLRLVDAGYIIEAQELEFLKSEVAAASEGARVKLENGESVHPKVAEFLELLE
RSPINHYHNKNTEELRLSIISTTLKMGMRKTCLHCKHSLKRVKYSYKTLMIGVTKQELTS
FYQKQSNEISSEEIQNRMRLSNKAILADECREYCRKIYENYPKFFLLLFPVLRHASPSVV
APFDIFFTNCIAVTPPKVRPAAKMDGRIIEHPQTEIYKNILTSNVALKAILEFNPENETS
NDKDIEFLYQTSKGGTKHEKIYNAWREMQTHVDETLDITMNQNKRAVGQGLKQILEKKEG
IIRMHMMGKRVNYAARTVITPDPNVDVEEIGIPELFAKKLTYPVPVTPWNIHDMRKFVMN
GPDVYPGANFVEDDHGKTLIPPNDPVRREAMAKLLTTPNAHHSLQVVHRHLMNNDILLLN
RQPTLHRPSIMAHKARILKGEKTFRLHYSNCKSYNADFDGDEMNAHCPQNEMGRSEAYNL
VHVPHQYLVPKDGTPLGGLIQDHIISGVKLSMRGRFFTKEDYYQLIFQGVSRQRGDLIFL
PPAIMKPRILWSGKQVLSTVILNIIPRGKKLICLTSTSKINSRAWESSKPRKWKAGGTPL
EDNVMSEAEVIIRQGELLVGILDKMHYGSTAYSLIHCIYELYGPTYSTRLLSAFARLFTY
FLQWEGFTLGPKDILVLPDADKQRTQIIEDSRKIGNATAATALNLPEDIPFDELKEKMTD
AFHSDPKFRTIMDRQFKSALDQFTNNINRCCIPTGLITKFPQNNLQLMVQSGAKGSAVNA
MQISCLLGQIELEGKRPPLMVSGKSLPSFPFFETSPKAGGFIDGRFLTGIQPQDFFFHCM
AGREGLIDTAVKTSRSGYLQRCLIKHLEGLNVNYDSTVRDSDNSVVQFLYGEDGLDITKS
QFFKTKMLSFLDDNAKIIGDKNVLAEVKNDEETADRLHKYVKSIKSWEKKNKNALAKRRV
SSFLNFCGQMKESTNVKNPNKMVKGRRRIDEKLCKMWEKMTEDERKDYRNKAFERCPDPI
VSKFLPGSCFGSITENMQKLIREYGRENPTRRKEFTEVMNLKAMQAVAPPGEPVGLLAAQ
SIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMLASKNIKTPSMDIPFKQHAKLDTM
SEKLRIKLGKVTVGDVLESINVKTRLVLRPQRVWEYKLLFRFLPRDAYKEDYCVKPKQIL
KYMSQVFFKLMFRGIMKLAKEKNSVIDFDEEKTKKSSKHEKEDFDIDNAEPEETSAEKNN
LADDSTDDEGMDDADATEANRKNKQADQKDYDEPDDDDEKQDADADADDNEEINEDEEKK
LLEGKEEELQEDEETASVIESNEFTEAYKYDKEHHLWCELIFHLPAKFKSLDLTAMLREV
ARKAVIWQVPCITRAITYFQGDQLMLKTQGINIVEMFQYNKLLDLDRLYSNDIHAIAQTY
GIEAAGRVIVKEVQNVFKVYGITVDPRHLFLISDYMTFNGTISALSRKGMESSASPLQQM
SFESCMKFLKAATVSGCTDNLSSPSSRLMVGQPCKSGTGAFTLLNDNRMFLSNFTRKAAK
QVSH
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgatttacttcaatcgtgggggcgattcggggacttttcatttggatgcaaatgaattg
aaattctctgccttcacctccgacgaggtgaagaaactcagcaaggtgaagatattcaca
gcccagacaatcgaccggctgggtcttgcccttcccggaggactctacgatcgccggatg
ggaccctatgacagagattccgatccttgtcagacttgtgggcgggcttttgtccagtgt
gaaggacatttggggcacattgaactgaatatgctggtgtacaatcccatcttcattcag
actgtgtacagtgtcctccggattagctgtttgtcgtgctttaagcttcagctcactgac
cacgtgcggtcactcttggagcttcagttgcgcctcgtggatgctgggtacatcattgag
gcacaagagctggaattcttaaagtcagaagttgctgcagcttctgaaggggctcgagtg
aagctcgaaaatggagaaagtgtccatccgaaagtggcagaatttctcgagctgctcgag
aggagccctatcaatcactatcacaacaagaacacagaggaattgaggctcagtatcatt
tccacgaccctcaaaatggggatgaggaagacctgcctacactgcaagcacagtctcaag
agggtcaaatattcctacaagacgctcatgatcggcgtcaccaaacaggaactgaccagc
ttctatcaaaagcaatcaaatgagataagtagcgaggagatacagaatcgcatgagattg
tccaacaaagcaatcttagcggatgaatgtcgcgaatattgccgtaaaatctacgaaaat
taccctaaattcttccttctcctctttcccgttctccgtcatgcgtctccctctgtcgta
gcgccctttgacatcttttttacaaactgcattgccgtgacgccgccaaaagttaggccg
gcggcaaagatggatggtcgaataattgagcatccgcagacagaaatttacaagaatatt
ttgacgtcaaatgttgcattgaaggctattctggaattcaatccggagaacgaaacgtca
aatgacaaagacattgaatttctgtatcagacttcaaagggcggaacgaagcatgaaaag
atatacaatgcttggagggaaatgcagacgcatgtcgatgagacgcttgacataacgatg
aatcagaataagagggctgtcggacagggattgaagcagatacttgagaagaaggagggg
attataaggatgcatatgatgggaaagagggtgaattatgcagctcgaactgttataact
cccgatcctaatgttgatgtggaagaaattgggattcctgagttgtttgccaagaaacta
acctatcctgtcccagttacaccctggaatattcatgatatgagaaagttcgtgatgaat
ggccctgatgtctatccgggagctaattttgtcgaggatgaccatgggaagaccctcatt
ccgcctaatgatcccgttcgcagggaagcgatggctaaactactaaccactccaaatgct
catcacagtctccaggttgtacatcggcatctaatgaacaatgatattttgctgctaaat
cgacagcctacgctccataggcccagtatcatggctcacaaggctaggatactcaagggg
gagaagacctttagactccactactctaactgcaaatcctacaacgctgacttcgacgga
gacgaaatgaatgcgcactgcccgcaaaatgagatgggcaggagcgaagcgtacaatttg
gtgcatgtgccccatcagtacttggtgcctaaggatgggactcccttgggaggactgatt
caggatcacatcatttccggagtgaaactctccatgaggggaagatttttcaccaaagag
gactactaccagctaatttttcagggtgtcagtcgtcagcgcggagacttaatcttcctt
ccaccggcaatcatgaaaccacgaattctgtggagtggaaagcaggtcctttccacagta
atcctcaacattattccacgcggtaaaaaactgatttgcttaacgtcaacgtcaaaaata
aattcaagggcctgggagagttccaaacctagaaaatggaaagctggaggaactcctctg
gaagacaatgtcatgtctgaagctgaagttatcattcgccagggagagcttctagtaggg
atcttggataagatgcactatggatcaacggcatacagtttgattcattgtatctacgaa
ttgtatggtccaacttattccacgcgccttttgagtgcctttgctcggctctttacctat
tttctccaatgggaaggatttacccttggtccaaaggacattctcgtactgccggatgca
gacaagcaacgaacgcaaatcatcgaagatagtcgcaaaattggaaacgccactgcggct
acagctctcaatttgccagaagatataccatttgatgaactgaaggagaagatgaccgat
gcatttcacagtgatccaaaattccggactatcatggacaggcagtttaagtctgccttg
gatcagttcaccaataacatcaaccgttgctgtatcccaacgggactcattaccaagttt
ccgcagaacaatttacagttgatggttcagtcgggagctaaaggatcagccgttaatgct
atgcaaatctcttgtctgctcgggcagattgaattggagggaaagaggccaccgttgatg
gtttctggtaagtccctacccagttttcccttctttgagacatcacccaaagctggaggc
ttcatcgatgggcgcttcttgacgggaattcaacctcaggacttcttctttcactgtatg
gctggtcgtgaaggtcttattgatacagcagttaaaactagtcgttcaggttacctccag
aggtgtttgattaaacacttggaagggttgaatgtgaattatgactcaactgtccgagat
agcgataattcggtcgttcagttcctctatggagaagacggattggacataaccaaaagt
cagttctttaagactaaaatgttgtccttccttgatgacaatgccaagataattggggat
aagaatgtcctggctgaagtgaagaatgacgaagaaactgccgatcggttgcacaagtac
gtcaagagtatcaaatcgtgggagaagaagaataaaaatgcattggcaaagagaagagtt
tcgtcatttttgaacttctgtggtcagatgaaggagtcgaccaatgtaaaaaatcccaat
aagatggtcaaaggacgacgtcgaattgatgagaagttatgtaaaatgtgggagaagatg
acggaggacgaaaggaaggattacaggaataaggcctttgaaagatgcccagatccgata
gtgtcgaaattccttccgggatcatgctttggttccattacggaaaacatgcaaaagctg
atccgggagtacggaagagagaatccgacacgcaggaaggaattcacagaggtcatgaac
ttgaaggctatgcaggctgttgctccaccgggagaacctgttggtcttctggcagctcag
tcaattggagaaccctcaacacagatgaccctgaacacctttcactttgccggacgtggt
gagatgaacgtaacgttgggtattccgcgtcttcgagagattcttatgttggcgtcaaag
aacatcaaaacaccttcaatggacatccctttcaagcagcacgctaaactcgacaccatg
tcggagaaattgaggataaaactaggaaaagtgacagttggagatgttcttgagtcaatt
aacgtcaaaactcgtcttgttcttcgaccacagagagtttgggagtacaaactcctcttt
cgttttcttccacgcgatgcctacaaggaggattactgcgtaaaaccgaaacagatcttg
aagtatatgagtcaggtcttcttcaaacttatgttccgcgggattatgaagttggccaag
gagaagaattcagtgattgattttgacgaggagaaaacgaagaagagttcgaaacatgag
aaggaggacttcgatattgacaatgccgaaccagaggagacgtcagctgagaagaacaat
ttggctgatgacagcacagatgatgaaggaatggatgatgctgatgcaacggaagccaat
cgcaagaacaaacaggctgatcagaaggactacgatgaaccagatgatgatgacgaaaag
caggatgcagacgcggacgctgatgataacgaagagatcaacgaggatgaggaaaagaag
ttgctggaggggaaggaggaggaattgcaggaagatgaggaaactgcgagtgttattgag
agcaatgaatttactgaagcctacaaatatgacaaggagcatcatttgtggtgcgaattg
atctttcacttgccggcaaagttcaagtcgctcgatttgacggcgatgctgcgtgaagtg
gccagaaaggcggtgatttggcaagttccctgcatcactcgagccattacgtactttcag
ggtgatcagttgatgctcaagactcaaggcattaacattgtagagatgtttcagtacaac
aaactcctggatttggatcgtctgtattccaatgacattcacgcaattgcccagacttac
gggattgaggcggcgggacgggtgatcgtgaaggaggtgcagaatgtgttcaaagtgtat
ggaattacagtggatccgcggcatttgttcctcatttctgactacatgaccttcaatgga
acaatctcggcactcagccgaaaagggatggaatcttcggcgtcgccgctgcagcaaatg
tcctttgaatcttgcatgaagttcctcaaagcggccacagtttccggctgcacggacaat
cttagctctccgtcaagtcggctaatggtgggacaaccgtgcaaaagtggaactggagcc
ttcactctcctcaacgacaacaggatgttcctcagcaacttcacacgcaaagctgcaaag
caagtttcccactaa
DBGET
integrated database retrieval system
