Phlebotomus papatasi: 129802986
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Entry
129802986 CDS
T10447
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13191
RNA-binding protein 16
Organism
ppap Phlebotomus papatasi
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppap03021
]
129802986
03041 Spliceosome [BR:
ppap03041
]
129802986
Transcription machinery [BR:
ppap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129802986
Spliceosome [BR:
ppap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129802986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
129802986
NCBI-ProteinID:
XP_055705236
LinkDB
All DBs
Position
2:complement(21425364..21441728)
Genome browser
AA seq
1240 aa
AA seq
DB search
MAMNMESVIAFNAELSGLIETKPPISKAKMGAITRSAMKAIKFYKHVVQSVEKFILKCKP
EYKVPGLYVIDAIVRQSRHQFGPEKDVFAPRFAQNMQQTFANLFRCAPEDKSKIIRVLNL
WLKNNVFSPEVINPLFDFFNPNRTHPLESQPMSQSMSVTNGMTSTTQIVADSPQVVQADE
QSRMSADMSNSHGNVGGQMELDPNIIRQLHHFQKLLIQQTGNDMGAGNSGQDQVKFNKKL
LDFDYGEDEEEEKTSSPNVTSSSSVLEVNSLNQLLQDPNVLRQLQNLQKLKEHEMEEKQT
KLTEMRLQEEAFEKHLVNVLKKLPFANECDLSRQTDQQQHVAPNQMYAMQHLQQAQMQQA
QMQQALQQQQQQMAQTGQPMPPAVPESTDPDVEFTGESGKVEVITLDGNDSDLSSPGRAE
RYKSRRRSRSRSRDRTRDRRRRSRTRSRSRSPRSRRRSSRERAREREREKEKEYDRERRR
KGLPDIKKEHLSVCSTTLWVGHLSKLVQQEELSDTFGRYGDIVSIDMIVPRGCAFIAMNR
RQDAYKAMNSLKGHKMQGRAITISWATGKGVKSKEWKDYWDLDLGVSYIPWSKIDHTTDL
TALEEGGMFDEDTLPEWLKEKRKAESKKIEFPGLDTSQPPPAAMMSMVAPFQIPGTPAGA
AAAAAAGRMMAPPLMPNMIPGLPLGVPPPQMMMTPMMQIPQMDKNVPPPTGGPATANPEH
FLALNFPMPPIPLPTGLVPPQVQPEAGAAAKSGHDDDRMEIENEEEAGGAGGGTGAGGAQ
GGVTETPKKDTPLSEQLLAMTNFFNRPPPLMSQPVSPSIVQSFANAAQDKKASTSSQEES
RENSRDREFRSRGRDRERSSRDRDRRDFGRGDRGSRWGSGERSRERQEKESNAGKSLTDR
LREMASENVEEFSRREGGGQQWRPQPLMSLFPEQGHPPMNRRGAGDGLLEGGPMIMPQAG
PPPFRHQEMFDGMRHREGRMDDFERRGGPNHRGDFFPPPRFGPMNNGGMRGMLPMGGGGR
NGPQFRMPRYGIKGPLMRGLPPGHPDFQFPDRPGFFGRDGPPGGFERDDRRRNGPPGVDR
RGGGGGMPGEGRRGGNRFQERDSKPQQQKSSRWGNESSTRGRQGQEPEDDGPPGVAREGE
QEGGQDDLGANGTEAVSPEALDCSGPGEDDLEECGGGSGGAGAAGGGGGGNSGGGEEIEV
PGKSTPLYDEPAEAPTQAAAPQEEAAPPAEEKEEKSESAE
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaatatggagagtgtgattgcgttcaatgcagagctctcgggcctcattgag
acgaaaccaccgatttctaaggctaaaatgggcgctatcacccggagtgccatgaaagcc
atcaagttctacaagcatgttgtccagagcgtcgaaaaattcatcctcaagtgcaagccc
gagtacaaagtgcccggactatacgtgattgatgccatcgtgaggcaatccaggcatcaa
tttggacccgagaaggatgtctttgctccccgttttgcccagaacatgcagcagaccttt
gctaatctcttcaggtgcgctccggaagacaagagcaaaataattcgggtgctgaatctt
tggctgaagaacaatgtcttttcgcccgaagttataaatcccctttttgacttcttcaat
cccaatcggacgcatccgttggagtctcagccaatgagccagagtatgagtgtgaccaat
ggtatgacgtctacaacacaaattgtggcagattctcctcaagtggttcaggctgatgag
cagagtcgaatgtctgcggatatgtccaattctcatggaaatgttgggggacagatggaa
ttggatcctaatatcattagacaactgcatcacttccagaagctattgatacagcagacg
ggcaatgatatgggagcgggaaatagtgggcaggatcaggtgaaattcaataagaagttg
ctggattttgattatggagaggatgaggaggaggagaagacatcgtcaccgaatgtgacg
agttcatcgagtgtactggaagtgaatagtttgaatcaattgctgcaagatccgaatgta
ttgcgtcagctgcagaatctgcagaagctcaaggagcacgaaatggaagagaaacagaca
aaattgacagagatgcgattgcaagaggaggcctttgagaagcatttggtgaatgtactc
aagaagttaccatttgccaatgaatgcgatctcagtcggcagacagatcagcagcaacat
gtagcgccaaatcaaatgtacgccatgcagcatttgcagcaggcacagatgcagcaagca
caaatgcagcaggcgctgcagcagcagcagcagcaaatggctcaaactggtcaaccaatg
cctccagccgttcccgagtccacagatcccgatgtggaatttacgggagagagtggaaag
gtggaagtgattactctcgatggcaatgactcagatctgtcaagtccgggacgtgcagaa
agatacaaatcccgtaggcgcagtagatcgagatcgagagacaggacaagggatcgaaga
cgcaggagtcgcacgagatcgcgttctagatcacccaggtccaggaggagatcttccagg
gagagagcaagggagagggagcgtgagaaggagaaggagtacgatcgggaaaggcgcagg
aagggattgccggacatcaaaaaggagcatctaagtgtatgcagcacaactctctgggtg
ggacatttgtccaaattggtgcagcaggaagaactcagtgacacctttggaagatatggg
gatattgtgagcatcgatatgattgtccctcggggatgtgcattcatagccatgaatagg
cgtcaggatgcctataaagcgatgaatagcctgaaagggcacaagatgcagggtcgtgct
atcacgatttcctgggcaactggcaaaggggtgaagagtaaagagtggaaggattattgg
gatctggatttgggtgtaagttacattccctggtccaagattgaccacacgacagatttg
acggcactggaagagggtggaatgttcgatgaggatacactgccggaatggctgaaggag
aagcgtaaggctgagtcgaagaagattgaatttccgggtttggatacaagtcaacctcca
ccggctgctatgatgtccatggtggcaccatttcagattcccggaacacctgctggtgct
gctgcggcagctgctgctggtaggatgatggcaccaccattgatgcccaatatgattcca
ggacttccattgggagttcctccgccacaaatgatgatgacacccatgatgcagattcct
cagatggacaagaatgtcccaccgccaacaggtggtcctgccacggcaaatcctgaacat
tttctggcccttaacttccccatgccaccaatcccattgccaacgggtttggtgcctcct
caggttcaacctgaagctggggcagcagcaaagtctggacatgatgatgatcgcatggag
attgagaatgaggaggaagcaggaggggcaggaggaggaacaggagcaggaggagcacag
ggaggagtaacagaaactcccaagaaagatactccgctgagtgagcaactcctggctatg
accaacttcttcaatcgtcctccaccgttaatgtcccaaccagtgtcgccatctatcgtc
cagagctttgccaatgctgctcaggacaagaaggcctccacatcgtctcaggaggaatcc
cgcgagaacagccgggatagagaattcagatcgcgtggacgagatcgcgagaggtccagc
agagacagggacagaagggactttggaaggggagacaggggcagccgatggggaagtgga
gaacgcagtcgggagcgacaggagaaggagagcaatgcaggaaagtcactgacggacaga
ttgagggagatggccagcgagaatgtggaggaattcagtcgcagggaaggaggagggcag
caatggaggccacagcctctaatgtcactgtttcccgaacaggggcatcctccgatgaat
agacgaggagctggagatggattgctggaaggtggtccgatgattatgccccaagctgga
cctccgcccttcaggcatcaagaaatgtttgacgggatgcgccaccgagaaggtcgaatg
gatgactttgagcgccgtggtggtcccaatcatcgtggagatttcttcccgccgcctcgc
tttggccccatgaataatggcggaatgagagggatgttgccaatggggggcggtggtcgc
aatggaccccaattcaggatgccacgctacggtatcaagggaccactcatgcgaggactt
cctcctggtcatccagacttccagtttcctgatcgtcctgggttctttggacgcgatggg
ccccccgggggcttcgagagggatgacagaaggagaaatgggccaccaggagtggatcgc
cgagggggtggagggggaatgcctggtgagggtagaaggggtggaaatcggttccaggaa
cgcgattcgaagccgcaacagcagaaatcttcgcgttggggcaatgagagttcgacgagg
gggcgacagggacaggagccggaggatgatgggccgccgggagtggcaagggaaggtgaa
caagagggtgggcaggatgatttgggagccaatgggacagaggcagtttcgcctgaagca
ttggattgtagtggtccaggggaggatgatttggaggaatgtgggggaggatcaggggga
gcaggagcagcaggaggaggaggaggagggaattcgggcggtggggaagagattgaggtt
ccggggaagtctacgccgctctacgatgagccggctgaggccccaactcaggctgctgct
ccgcaagaggaggcggctcctccggctgaagaaaaggaagaaaagagcgaaagtgctgag
taa
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