Phlebotomus papatasi: 129804236
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Entry
129804236 CDS
T10447
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ppap Phlebotomus papatasi
Pathway
ppap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129804236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129804236
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129804236
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129804236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
129804236
NCBI-ProteinID:
XP_055707338
LinkDB
All DBs
Position
2:71455064..71489302
Genome browser
AA seq
2422 aa
AA seq
DB search
MNQDSLSFTLTQISYLVSTLNKKNCDKNSRQIDKLVEEFGLEADRHYLRCLFASIDFGDT
QIAKHSIQAKLLCTNLLFLLGRPSFVSTICYTFENYLSSPSQKTLKLSPNFLNSVARTLS
LSQIKEVAIAYSLLHSANPELAKYAEQHLKTCLPKFIQSYIEIDPSRPNQEGSLNDIAPE
LLQVIISVISHGKHSQFGLSDIIYNKFITHLCRDFPRDRVPLVLAPLLYAEETEIAADKV
STGNQGIVSSGIMDTSWANLVMDIGYAFTVTVEDCKNHLIKVTGREINPQDVAKILALMC
RTHSNLSDSSINLPTPGAFWSSSGGQGGAGAGGSGAADSKEKVTGQPGAPSTDHVTWKPD
IFVQALKEVVPSLSWKDVCVGLDHAEFVLKDRAGLNLLITTLRLGLQSMTPAQNFPAECL
YRHWTNTEGQLSLITLILKNSDIFSFADYIFTSVSVELLKTPPETDNKEIMAWKSLHLVE
VLLYIAENGFYTPVMELFKIPIQHCPDVLFMALLQINPPLTVLRQELFQTLIPIFLGNHP
NSGAILHHAWNSASLSPSLRHIIMVSMSDWYLRGDNDQQRLSRILDVAQDLKALSNLLNV
RSFHFVIDLACLASRREYLKLEKWLSDKIREHGEPFVQVMVKFLQRRCPQILGAKIIDDQ
IPKAAQLPHETLNTMMSCLHACVGNVQPELNEIIMTMNANCNNLLKMQQQRQPPPPNVLR
QHRGIETPFNTSTLGGQIFTAPSVDSFASNMAGLNLGGPGNGAFNFGVLGNLMSTPASPS
RLLTAPSNSPFSIMPMQTTPQVNMARIQPTPTGDKITMAPNTQQLFTDGTITVSKEAEDE
ANSYFQRIYNHPPHPTLSIDEVLDMLQRFQESRNRCENEVYTCMLRNLFEEYRFFPQYPD
KELQITAQLFGGMIERNLVATYMSLGLALRCVFDALRKPEGSKMYYFGITALDRFKNKLH
LYQKYCEHVRTIPHFDQFPPHLIEYVEYGANQQEPPNKSQALPSSLSQMMPVSSGGGTST
LYSRSSSVTSNLTTTPTAKTPNPTNPPSSSLTTSRVKSIANATNIDTLLCATQEREEKII
TPPDAVQEKTAFIFNNLSQLNLQQKCEEIKDIMTKDYWPWLSQYLVLKRASIEVNFHVLY
SNFLDALKIAEINRLVTKETFRNIRVLLRSDKSIANFSDRSLLKNLGHWLGMLTLGRNKP
ILHVDIDLKSLLMEAYHKGQQELLYVVPFVAKVLESCAKSKVFHPPNPWTMAIMNVLAEL
HQEPELKLNLKFEIEVLCKNFNIDVSELKAVVYLKDSEKAHKIEYQLSQPGKPKEPIQPI
APLHSSSNASVSDDSGPVPASAASTSSGNVTVSPNQSLDAQSTASGPPEPRFNYMEITVS
NYSCINNLMTISPNILLLHTQPHLKALVRTAIERTLTDWMTPVVERSVKIATTTCEQIIR
KDFALDGDENRMRTAAHYMIRNLSAGMAMITCREQLLLTITTNIKSAFNAAVTPQQKEIV
DAAATQLASDNMELACAIIQKTTVEKAIPEIDKRLANDYEIRKVTRQEGRRYCDEAVYNY
HCENMPKRIRLKIGGISSEQFAVYDEFARNIPGFQPITDQDLAHFLPTQTFQVSSQQDPI
SMSSFAAAPLPQQTVGSSQFSGSDFGTVYDDLGSKIESFLNSTMNIHQLQMQTTNLASLL
DYLVQARRQRDNMSAVTLLNKAVEGLLDGFVNIPEHAEHIKIYRDIHLRVMRMMQDSRAF
GVVATNRIITKYLFECREEIRYNLEAIDLLFSSNFINVPIFDIMLSQLMDNGNNYLAVVF
GMQLIQHFFIEERQNTVLNESDFPNTIDLLTRISMHHHHRAPEGLAHVIDIVRLNQDPNN
LLSIERMQNPHINSGIVQVRSTNEMDDPPGLISKTEYLLKDWVNIYHNQALNRDPIKIFG
QFVNKMNIIGILKTDDLVTRFFRQATQLCIDVVYTNINEVTNIPTVGKSKCFQWIDAFVR
LIAMLVKNSGDTVNATTKINLLNKVLGIVVGVLQQDQEVRGVAFQQLGYHRLFIMLFLEL
SNPEPVLENISLHTVTAFCHTYHLIRPSVAPGFCYSWLELISHRVFIGRVLAMIPQQKGW
SMYSQLLMDLFKYLAPFLRNAELAKPVTLLYKGTLRVLLVLLHDFPEFLCDHHFGFCDAI
PPNCIQMRNIILSAFPRNMRLPDPFTPNLKVDMLSEISTAPRIFTNYVANIQPATFKKDL
DSYLKARAPVTFLSELRGHLQVSNEPGSRYNIPLMNALVLYVGNQAITLIRSKNLVPNMT
TIVHSAHMDIFQNLAVDLDNEGRYLFLNAVANQLRYPNSHTHYFSCVLLYLFVEANSEAI
QEQITRVLLERLIVNRPHPWGLLITFIELIKNPVYKFWDHDFVHCAPEIEKLFESVARSC
MVVKANNQQTLNSVEAELQECN
NT seq
7269 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggattctttgtcattcactctaacgcagatcagttatttggtttctaccctg
aataagaagaattgcgacaagaatagccgacaaattgataagcttgtggaagaattcggc
ttggaagcggaccgacattatctgcgttgtttattcgcatcaattgactttggagatact
cagattgccaaacactctatccaggcgaaacttctgtgtacaaatctgctctttctactc
ggacgaccatcatttgtctcaactatctgctacaccttcgagaactacctgtcatcacca
tcacagaagacactgaaattatcaccaaattttctcaattcagtggcacgaacgctgagt
ttgtcacagataaaagaagtagcaattgcatattcgctcctccattcagcaaatcccgaa
ctagccaaatacgctgaacaacacttgaaaacttgtctcccaaagttcattcagtcgtac
attgaaattgatccatcgcgtcccaatcaagagggtagtttgaacgatattgcaccggaa
ttgctgcaagtaattatttcggtgatatcacacggaaaacatagtcaatttggtctatcg
gatataatttacaataaatttataacacatctctgtcgagattttccacgggatcgtgta
ccattggtcttggcaccactgttgtacgctgaagagacagaaattgctgctgataaagtg
tcaacgggtaatcagggaatagtatcaagtggaataatggatacatcttgggcaaatctt
gtcatggacattggctatgcatttacagtgacagtggaggattgtaagaatcatttgata
aaggtgaccggaagggagattaatcctcaggatgttgctaaaatattagcattaatgtgc
cggacacatagtaatctttcggatagtagtatcaatttgcccacaccgggagctttttgg
tcatcttctggtggtcagggaggtgctggtgcgggtggaagtggtgctgcggatagtaaa
gaaaaagttactggacaacctggagcaccatcgacggatcatgtgacatggaaaccggat
atttttgtgcaggcactcaaggaagttgtgccaagtttgagttggaaggatgtctgtgtg
ggattggatcatgcggaatttgtgctgaaggatcgtgcaggactcaatctcttgattaca
acactgagattgggattgcaatcgatgacaccggcacaaaattttccagctgaatgtctc
tacagacattggacaaataccgaaggtcaattgtcactgattacgttgattctcaagaat
tcggacatcttctcatttgctgactacatctttacgagtgtctcggtggaattgctaaag
accccaccagagacggacaataaggaaattatggcgtggaaatcgctgcatttggtggag
gtgttgctgtacattgctgaaaatggcttctatacgcccgtgatggaactgttcaagatc
ccgattcagcattgtccggatgtgctgtttatggctctgctacagataaatccaccattg
acggtgctacggcaagaattatttcaaacacttattcccatttttctgggcaatcatccc
aattctggtgcaattttgcatcatgcctggaattcagcgagtctcagtccatcattgagg
catattataatggtgtcaatgagtgattggtacttaaggggcgataatgatcagcagcgt
ctgtcgcgaattctcgatgtagcgcaggatctcaaggcgctctcgaatcttctcaatgtt
cgatcttttcattttgtcattgatttggcctgcctggcgtccaggcgggagtatctaaag
ctagaaaagtggctgagtgataagattcgagagcatggtgaaccctttgtgcaagttatg
gtgaaattcctccagagacgttgtccccagattctaggtgctaaaattatcgatgatcag
attccaaaggcagcccaattgccccatgagacactcaacacgatgatgtcctgcctccat
gcttgcgtgggaaatgtccagccagaactcaatgaaattatcatgacaatgaatgccaat
tgcaataatttgttgaagatgcagcagcagcgacagccaccgccgccaaatgttctgcga
cagcatcgtggaattgagacaccattcaatacatcgacactcggtgggcaaatctttacg
gcaccatcggtggattcttttgcatcaaatatggctggtttgaatttgggtggtccggga
aatggagcattcaattttggtgtactgggaaatctaatgtcaactccagcatctccttcg
agactcctgacagctccatccaacagtcccttctccataatgccaatgcaaacgacacct
caggtcaatatggcaaggattcagccaacaccaacaggtgataaaataacaatggcacca
aatacccagcaactgttcacggatggaactatcactgtttctaaggaggctgaagatgaa
gccaatagttatttccagcgcatctacaatcatccaccgcatccaacgctttcaattgat
gaggtccttgacatgcttcaacgtttccaagaatcccgcaatcgttgcgagaatgaggtg
tacacgtgtatgctgaggaatttgtttgaagaataccgatttttcccacaatatcccgac
aaggaacttcagataacagctcagctttttggtgggatgatcgaaaggaatttggtggca
acatatatgtcccttggactggcactacgttgtgtctttgatgcattgcgcaaacctgag
ggatccaagatgtactactttgggattacagccttggatcgtttcaagaataaattgcat
ctttatcagaaatattgtgaacatgtccgcacaattcctcattttgatcaatttccaccg
catctgattgaatatgtcgagtatggtgcgaatcagcaggaacctccgaataaatcccag
gccttaccgtcctcattgtcacagatgatgccagttagtagtggtggtggtacatcgaca
ttatatagtcgcagtagttcagtgacaagcaatttgaccactacgccaacggctaaaacg
cccaatccaacaaatccaccatcatcgtccttgaccacgtcaagggtaaagtctattgct
aatgccacaaatattgatacattgctgtgtgcaacgcaggaaagggaggaaaagattata
acaccaccggatgctgtgcaggagaaaacggcattcatcttcaataatttgagtcaactc
aatctgcagcagaagtgtgaggaaattaaggatatcatgacgaaggattattggccatgg
ttatcgcagtatttagtgctgaagcgtgcatcgattgaggtgaattttcatgtgctctat
tcgaattttttggatgctctcaaaattgcagaaatcaatcgattggtgaccaaagagact
ttccggaatattcgggtgctgttgcgttcggataagagtattgctaatttctctgatcgg
agtctcttgaagaatctgggtcattggctgggaatgttgacgctgggacggaataaaccc
attctccatgtagacattgatttgaaatctcttctgatggaggcctatcataagggtcaa
caagagctgctctatgtggtgccctttgtggccaaggtgttggaatcttgtgccaaaagt
aaggtttttcatccgccaaatccgtggacaatggcaatcatgaatgtcctggcggagttg
catcaggagccagaattgaaactcaatcttaaatttgagattgaagttttatgcaagaat
ttcaatattgacgtgtccgagctgaaggcagtggtttatctgaaagacagtgaaaaggct
cataagattgagtatcaactgtcacagcctggaaaacccaaagaacccattcagccaatt
gcaccacttcatagcagtagcaatgcttcggtatcagatgattcaggacccgttccggct
tctgctgcctcaacatccagtggaaatgtcacagtgtctcccaatcaatccttggatgcc
caatcaacagcttcgggaccaccagaaccgagattcaactacatggagatcaccgtatca
aattattcctgcatcaataatcttatgaccatttcaccaaatattctcctgctgcacact
cagccccatctcaaggcactcgtgaggacggctattgagcgtactctgacagattggatg
acaccagttgtggaacgaagtgtcaaaatagctacaacaacgtgcgaacagattataagg
aaggactttgcactggacggggatgagaacaggatgcgaacggcagctcattacatgata
agaaatctgtcggcgggaatggccatgattacgtgtcgtgagcaactgctactgaccatt
actaccaacattaagagtgccttcaatgctgccgtgacgccacaacagaaagaaattgtc
gatgcagcggctacgcaattggcgtcagataatatggaattggcttgtgccattatccag
aagacgacagtggagaaggcaattcccgaaattgacaaacgcctagctaatgactatgaa
atccgcaaggtaacgaggcaagagggtcgaaggtactgcgatgaagcagtttacaactat
cattgcgagaatatgcccaagaggattagattgaagattggaggaattagcagtgaacag
tttgctgtttatgatgaatttgccagaaatattcccggatttcaacccattaccgatcag
gatctggcacattttctgccaacgcagactttccaggtctcttcccagcaggatcccatc
tcgatgtcatcctttgctgcagctccattgccacagcagactgttgggagcagtcaattt
tccggatcggactttggcacggtctacgatgatcttggcagcaagatagagtctttcctc
aacagtaccatgaatatccatcagcttcagatgcaaacgaccaatttggcatcattgttg
gattacttggtgcaagcacgtaggcaaagggacaacatgagtgctgttacgctactcaat
aaagctgtcgagggactcttggatgggtttgtcaatattcccgaacatgctgaacacatc
aaaatctaccgcgatattcatttgcgtgtgatgcgaatgatgcaggatagccgagctttt
ggtgttgttgcgacaaatcgcattataacaaaatacttgtttgaatgtcgcgaggagatt
cggtacaatttggaagcaattgacttgctcttctcgtccaatttcatcaatgtgcccatt
tttgacataatgctgagtcagttgatggacaatggtaataactatttggccgtggtattt
ggtatgcagctcattcagcatttcttcattgaggaacgtcagaatacggtgttgaatgaa
agtgatttcccaaataccattgatctgctaacgaggatctcaatgcatcatcatcatagg
gctccggaaggtttggcccatgttattgatattgtgagattgaatcaggatcccaataat
ctgctgtccattgagagaatgcagaatcctcacatcaattcgggcattgttcaggtgcgt
tcaaccaatgaaatggacgatccacctgggcttattagtaaaacggaatatttgctcaag
gattgggtcaatatctatcacaatcaagctctcaatcgtgatcccatcaaaatttttggt
caatttgtcaataagatgaacattattgggattctcaagacggatgatcttgtcacaaga
ttcttccggcaagctactcaactctgcattgatgtggtatacacgaacatcaatgaggtg
acaaatattccaactgtgggcaaatctaagtgtttccagtggattgatgcttttgtgagg
ttgattgcaatgctagtgaagaattctggagatacagtcaatgctaccacaaagattaat
ctcctgaacaaggtgctgggtattgttgtgggggtgctgcagcaagatcaggaggttcgt
ggtgtcgcttttcaacaactcggatatcataggctcttcatcatgctcttccttgaactc
agcaatcctgagcccgttctggagaacatcagtcttcatactgtcacggcattttgtcac
acatatcacctgatacgtccatctgtggctcctggattttgctattcatggctggaattg
atctcgcatcgagtgtttattggacgtgtcctggcgatgattccacagcaaaaaggctgg
tcaatgtactcgcagttgctgatggatctcttcaagtatcttgccccatttttgcgcaat
gccgaactggctaaacctgtcacattgctgtacaagggaacactgagggtactcctggta
ctcctccatgatttccctgaattcctctgtgatcatcactttggcttctgcgatgcaatt
ccaccaaattgtattcaaatgcgcaacattattttgtcagcctttccacgcaatatgcgc
cttccggatccatttacacctaatctcaaagtggacatgctgagtgaaatctcaactgct
ccaaggatcttcacaaattatgtcgcaaacatccaaccggcaactttcaagaaagatttg
gattcgtatctcaaggcaagggccccggtgacgttcctgtctgagctcagaggacacctt
caggtgtccaatgagcctggatcgaggtacaatataccactgatgaatgctctggtgttg
tatgtgggaaatcaagcgatcacattgattcgatcgaaaaatctcgtacccaatatgacg
acaatcgttcacagtgcccacatggacatcttccagaatttggctgtggatcttgacaat
gaaggaaggtatctcttcctgaatgccgtggctaatcaattgagatatcccaatagtcat
acgcattacttcagttgtgttctgttgtatctcttcgtggaggccaattcggaagcaatc
caggaacaaataacacgtgtcctccttgaacgtcttattgtgaatcgtcctcatccttgg
ggattgctgattacattcatcgagctcatcaaaaatcccgtatataaattctgggatcat
gattttgtccattgtgcaccggaaattgaaaagttatttgagtcagttgcacgttcttgc
atggtggtaaaggcaaacaatcaacagacgctcaatagtgttgaggctgaattgcaagag
tgcaactga
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integrated database retrieval system
