Phlebotomus papatasi: 129804756
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Entry
129804756 CDS
T10447
Name
(RefSeq) polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
ppap Phlebotomus papatasi
Pathway
ppap03015
mRNA surveillance pathway
ppap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129804756
09123 Folding, sorting and degradation
03018 RNA degradation
129804756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129804756
03041 Spliceosome [BR:
ppap03041
]
129804756
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129804756
mRNA cycle factors
Stress granule specific factors
129804756
Spliceosome [BR:
ppap03041
]
Complex C
Other components
Complex C specific factors
129804756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
129804756
NCBI-ProteinID:
XP_055708321
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All DBs
Position
2:complement(84230085..84242181)
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AA seq
650 aa
AA seq
DB search
MASLYVGDLHQDITEAMLFEKFSTAGPVMSIRVCRDMMTRRSLGYAYVNFQQPADAERAL
DTMNFDLLKSRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGNILSCK
VAQDEKGSSKGYGFVHFETEESANTSIDKVNGMLLNGKKVFVGRFIPRKEREKELGEKAK
LFTNVYVKNFGDELSDETLKTMFEKYGPITSHKVMIKDDGKSRGFGFVAYESAEAAEAAV
SALNGKELNDGKMLYVGRAQKKAERQMELKRRFEQIKNERLSRSQGVNLYVKNLDDTIDD
EILRKEFTQFGTITSAKVMMEDGRSKGFGFVCFSAPDEATRAVTEMNGRIVGTKPLYVAL
AQRKEDRKAHLASQYMQRMANMRMQQMGQLYQPSGAAGYFVPSIPPTQRFYGPQMTQLRT
TPRWATQPTIRQAGGVPNANSTAVAVGVPTAGYPNLSSGAAAGQYRPGGGASSVRSGQQP
GQGGQNAQASMRNVARPITGQQNAAGAIQGRQIAAPVANAGRAGNYKYTTNMRNPQQQLV
SLGQTQPVQQAVHVKGQEPLTASMLASALPAEQKQMLGERLFPLIESMYPQMAGKITGML
LEIDNSELLHMLEHSESLKAKVEEAVAVLQAHQAKQQVVTSGKMEFKTQE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctctatgttggagaccttcaccaagacatcactgaggctatgctctttgag
aaattctcaacggcgggccccgttatgtctattcgcgtgtgcagggatatgatgacccga
cgatccctgggctacgcctacgttaacttccagcaacccgctgatgctgaacgtgccctg
gatactatgaattttgacttactgaagagtcgtccgattcgcataatgtggtctcagcgt
gatccatcattgaggaaatcgggcgtggggaatgtgttcataaagaatttggacaagagt
attgataataaggccatgtatgacacattttcggcctttggcaatatcttgagctgcaaa
gtggcccaagatgagaagggttcttccaagggctatggttttgtacattttgaaactgaa
gaatcagccaatacgtccattgataaagtaaatggtatgttgctcaatggcaaaaaagtc
ttcgttggcagattcattccgcgcaaggagcgcgagaaggagctgggagagaaggctaaa
ctcttcactaatgtctacgtgaagaatttcggtgatgaactcagtgatgaaacgctcaaa
accatgttcgagaagtacggaccgattaccagccacaaagtgatgatcaaagacgacggc
aaatcacgtggttttggtttcgtggcctatgaaagtgccgaagcagctgaagctgctgtt
tcggcactcaatggcaaagagctgaatgatgggaagatgctgtatgtgggcagggcacag
aagaaggctgagcgacagatggaactgaagagacgctttgagcaaattaagaatgaacga
ctgagtcgcagtcaaggagttaatttgtatgtgaaaaatctcgatgataccattgatgat
gagattttgcggaaggaatttacacaatttggcacaataacatcagccaaggtgatgatg
gaggatggaaggagcaaaggtttcgggtttgtctgtttttcagctccggatgaggccaca
agggcagtgacggagatgaatggacgaattgtgggtacgaaaccgctgtatgtggcattg
gcacagaggaaggaggatagaaaggctcatctggccagtcagtatatgcagaggatggca
aatatgaggatgcagcagatgggacagttgtatcaaccgagtggagctgctgggtacttt
gtgccaagtattccgccaacacagaggttctatgggcctcagatgacacagctgaggacg
acaccgagatgggctacacagccgacaataaggcaggcgggaggtgtgccgaatgccaat
tcgacggctgtggctgttggagtgccaactgctgggtatccgaatttgtcatcgggagca
gcagcgggtcagtatagaccgggaggaggtgctagtagtgtgagatcgggccagcaacca
gggcagggtggacagaatgctcaggcgtcgatgaggaatgtggcgaggccgataacgggg
cagcagaatgcagctggagctattcagggtcgacagattgcagcgccagtggcaaatgcc
ggtcgggctggaaactacaagtacacaacaaacatgcgcaatccccagcaacagctagtg
tccctgggccagacgcagcccgtgcagcaggcggtgcatgtgaagggtcaggaaccactg
acggcttctatgttggcatcggctcttccggcagagcaaaagcagatgctgggtgagcga
ttgttcccgctcattgagagtatgtatccacagatggcgggcaaaattacgggaatgttg
ctggaaattgacaattctgaattgctgcatatgttggagcacagtgagtcactcaaggca
aaagtggaggaggctgttgctgtcctccaggctcatcaggcaaagcagcaggttgtgaca
tctggcaaaatggaattcaagacacaggaatag
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