Phlebotomus papatasi: 129804833
Help
Entry
129804833 CDS
T10447
Name
(RefSeq) protein HBS1 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ppap Phlebotomus papatasi
Pathway
ppap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129804833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129804833
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129804833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
GTP_EFTU_D2
Ras
Roc
Motif
Other DBs
NCBI-GeneID:
129804833
NCBI-ProteinID:
XP_055708448
LinkDB
All DBs
Position
1:complement(49491394..49501566)
Genome browser
AA seq
673 aa
AA seq
DB search
MSRHRNVRSMDYKEEYEGYDDVFGHSVDDEGCISPTDAQQWIYDRARGQQSIATFMASNR
DIQEEDEGREDDEEHEKERRDSESYQLPELPDDEMVRLMSVMDEIRSIVGDSVTEKRLVE
TIMRFNYDMAQSLDSILNPPTTTACATATKITEKESSPAIEKGVGPRLLEKFAKPPAAPT
VTVTPTTDKANVKRGFEVNSPNLQSPVVSGRNTPEIGDEGRTPSRAGAKESHRNAQEMYQ
KERKSGKSHIHMVVIGHVDAGKSTLMGHLLFDLGNVPQRMMHKYEQESKKVGKSSFMYAW
VLDETGEERTRGITMDVGSSRFETDNKIVTLLDAPGHKDFIPNMISGATQADVALLVVDA
TTGEFETGFESGGQTREHALLVRSLGVSQLGVVVNKLDTANWSQERFDEIVGKLKVFLKQ
AGFKEGDITYIPCSGLTGENLVKTPTDDKLLSWYSGPTLVNVIDNFKTPERSVEKPFRMS
VNDIFKGTGSGLCISGRIETGVVCLNDKILVCPLREQAQVKGIQIDEVSHNSGFAGDQVS
ITLSGADISNISVGHMLCDMANPVPVAQRIRARIVVFNVRVPITIGFPVLLHHQSSIEPA
SIVKLKAQLHKGSGEVIKKNPRCLGNNSCALVEIETIKAICVEKYSDIKELGRIMLRVGG
VTIAAGLITDIVK
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtcatagaaatgttaggtcaatggactacaaggaggaatatgagggctacgat
gatgtatttggccactcggtggacgacgagggatgcatttcgcctacagatgctcaacag
tggatctatgatcgtgcccgcgggcagcaaagtattgcgacttttatggcatcaaacagg
gatattcaggaggaggatgagggtagggaagatgatgaggaacatgagaaggaacgtagg
gattctgagagctaccagttgcctgaattgccagatgacgaaatggtaagattgatgtcg
gtgatggatgagattcggagtattgtgggggattctgtgacagaaaagaggcttgtggag
acaataatgcgcttcaattacgatatggcacagtctctggacagcattctcaatccacca
actacaactgcatgtgccacagcaacgaaaatcaccgaaaaggaatcgagcccagccatt
gaaaaaggcgtgggcccaaggttgctggagaagtttgcaaagcccccagcagcacccacg
gtcactgtgacccccacgacggacaaagccaacgtcaagcgtggcttcgaagtgaattcc
ccgaatctccagtctcccgtggtgtcgggacgcaatacgcccgagatcggtgatgagggc
aggacaccgagtcgtgctggtgccaaagaaagccaccggaatgctcaggagatgtaccag
aaagagcgaaagtccggcaaaagtcacattcacatggtggtgattggacatgtggatgca
ggcaagagtacactgatggggcatctcctgttcgacttgggcaatgttccgcaacgcatg
atgcacaagtacgagcaggaaagtaagaaggttggcaaatccagcttcatgtatgcttgg
gtgctggatgaaacgggtgaagagagaaccaggggcatcacaatggacgttggcagctcg
agatttgaaacagacaacaaaattgtgacattgttggacgctcctggccataaagacttt
attccaaacatgatttcgggtgcaacgcaggcagatgtagctctgctagtggtggatgct
acaactggtgaattcgaaacggggtttgagtctggtggtcagacgcgagaacatgccctg
ctggtgagatctttgggcgtgagtcagcttggagttgttgtgaataagctggacacggca
aattggtctcaggagcgcttcgatgagatagtcgggaagttgaaggtattcctgaagcag
gcaggcttcaaggagggcgatatcacctatattccatgctctgggctaacgggggagaac
ttggtgaagacgccgacagatgataaacttctcagctggtattctggaccaactctcgtt
aatgttatcgataattttaaaacaccagaacgttcagttgagaaacccttccggatgtct
gtgaatgatattttcaagggtactggatccgggctgtgcatttcgggacgcatcgaaacg
ggtgttgtttgtctcaatgacaaaattcttgtgtgtccattgagggaacaggctcaagtg
aagggaattcagattgatgaggtgtctcataattctggctttgctggtgatcaggtgagc
atcacgctgtctggggcagatatatcaaacatttcagtgggtcatatgctctgcgatatg
gcaaatcctgtgccagtggcgcagagaattcgtgctagaattgtcgtcttcaatgtacgt
gtgcccattaccattggctttccggttctgttgcaccatcagtcatctattgagccggcc
agcatcgtaaagctgaaggctcagctgcataagggatctggagaggtgatcaagaaaaat
cctagatgtttgggcaataattcttgcgctctcgtcgagattgagactataaaggccatt
tgtgtggagaaatactcagatatcaaggagcttggccggatcatgctccgagtgggtgga
gtcaccattgctgcaggtctcatcacagacattgttaaatga
DBGET
integrated database retrieval system
