KEGG   Phlebotomus papatasi: 129805382
Entry
129805382         CDS       T10447                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
ppap  Phlebotomus papatasi
Pathway
ppap03030  DNA replication
ppap03410  Base excision repair
ppap03420  Nucleotide excision repair
ppap03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129805382
   03410 Base excision repair
    129805382
   03420 Nucleotide excision repair
    129805382
   03430 Mismatch repair
    129805382
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppap03032]
    129805382
   03036 Chromosome and associated proteins [BR:ppap03036]
    129805382
   03400 DNA repair and recombination proteins [BR:ppap03400]
    129805382
DNA replication proteins [BR:ppap03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    129805382
  DNA Replication Termination Factors
   ELG1-RFC complex
    129805382
Chromosome and associated proteins [BR:ppap03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    129805382
DNA repair and recombination proteins [BR:ppap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     129805382
  Check point factors
   HRAD17(Rad24)-RFC complex
    129805382
SSDB
Motif
Pfam: AAA Rep_fac_C RCF1-5-like_lid DNA_pol3_delta2 AAA_16 AAA_assoc_2 AAA_22 AAA_24 Rad17 AAA_11 Mg_chelatase DNAX_ATPase_lid AAA_14 AAA_30 AAA_19 RuvB_N bpMoxR AAA_5 DUF815 TIP49_C ResIII VMAP-M1 SLFN-g3_helicase ATPase_2 Cdc6_lid nSTAND3 AAA_7 Cdc6-ORC-like_ATPase_lid
Other DBs
NCBI-GeneID: 129805382
NCBI-ProteinID: XP_055709243
LinkDB
Position
1:complement(49769961..49771284)
AA seq 360 aa
MHAFLKTGKTTGLPKVPSEASTSAGKERKVVPRPWVEKYRPRTVDDVVEQGEVVAVLKQS
LESCELPNLLLYGPPGTGKTSTILAAARQLFGDLSKDRILELNASDERGIAVIRTKVKNF
AQLTCSSVRPDGKPCSPFKIIILDEADSMTHAAQAALRRTMEKESSTTRFCLVCNYVSRI
IEPITSRCTKFRFKSLGHDKIVERLKFICQEEKVKVDDDALEVIIECSGGDLRRAITVLQ
SSHRLFGTSEESITKEHVLEISGIIPQQFLEEFLDICRSQDYSKLEKYVENLSFEAYSVG
QLLEQLNDFVINHRELSNKQKCILGEKIAECSFRMLNGALEYLQIMDLGCTAILAFKNNP
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgcacgcttttctaaaaaccggaaagactacaggactccccaaagttcccagtgaagct
tcaacaagtgctggaaaagagcgaaaagtagttccacggccatgggttgagaaatatcgc
cccagaactgtggatgatgtggtggaacagggagaagttgtggctgtacttaagcaatct
ctggagagttgtgaattgccaaatttgcttctctatggccctcccggaacgggaaagaca
agtacgatccttgcagctgctcgtcaactttttggagatctctccaaagatcgcatcctg
gagctcaatgcatcggatgagcgtggaatagctgttatcaggacaaaagtgaagaatttc
gctcaactaacttgcagctctgtgcggccagatgggaaaccttgttctcccttcaagatt
atcattctagatgaagcagattccatgactcatgctgctcaggcagctctccgtcggaca
atggagaaggagagttctacaacgagattctgtctggtctgcaactatgtgtccaggatc
atcgaaccaatcacttcccgatgcacaaaattccggtttaagtctttaggtcatgataag
attgtggaacgcttgaagtttatctgccaggaggagaaagtgaaggttgatgatgatgct
ctggaagtgattattgagtgttccggaggtgatctccggcgagccataacagttcttcag
tccagtcatcggctctttggcacttcagaggagagtattaccaaggaacatgtcctggag
atctctggaattattccacagcaattcttggaggagtttctggatatctgtcgctcccag
gactactccaaattggagaagtatgtggagaatctctcttttgaggcttacagtgttggg
caactccttgagcaactcaatgattttgtcatcaatcacagagagctcagtaacaagcag
aaatgcatcctgggagaaaagattgcagaatgttccttccggatgctcaatggagctctg
gaatacctccaaatcatggatctgggttgtacagccattttggcattcaaaaataatccc
tga

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