Phlebotomus papatasi: 129805918
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Entry
129805918 CDS
T10447
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ppap Phlebotomus papatasi
Pathway
ppap04382
Cornified envelope formation
ppap04512
ECM-receptor interaction
ppap04518
Integrin signaling
ppap04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129805918
04518 Integrin signaling
129805918
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129805918
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129805918
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppap04147
]
129805918
00536 Glycosaminoglycan binding proteins [BR:
ppap00536
]
129805918
Exosome [BR:
ppap04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129805918
Glycosaminoglycan binding proteins [BR:
ppap00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129805918
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
129805918
NCBI-ProteinID:
XP_055710141
LinkDB
All DBs
Position
3:79475768..79488709
Genome browser
AA seq
1798 aa
AA seq
DB search
MGIPYRRLVTIATILFCVVGTRADSRRRYINQRQFWNDPSSGGVGLFRRPDYYRSTPEPV
QPEVDPSYDIIDTASGRLHGPKRNCTSSGCCIPKCFAEKGNRGYPGVPGVPGPKGVQGFA
GAEGLIGSKGMKGEPGPSGPRGPKGDRGAQGSPGFPGAAGFPGHKGEDGPPGIPGRDGCN
GTDGLPGLRGLDGVPGPRGLPGIPGSKGDKGEPAELNINYLKGQKGETGYEGRPGDPGET
GPPGPRGPDGAPGMPGIPGSKGSTGPKGDKGQGCISIQGPPGPMGLKGDKGEKGESSPGE
VVGPPITTTGPKGDRGYPGEKGDVGPKGEQGELGAPGFPGDRGPQGEKGLPGQPGPRGRD
GNYGPTGPPGQKGDRGNEGLRGLDGKPGQKGEPGESGLQGVPGMVGPPGPPGGGRGSPGP
PGPAGPRGYRGLPGPKGLDGLKGEQGPRGVPGAKGGPGIPGRVGMEGLAGEKGQKGEGGI
IGMPGVQGPRGFIGPPGADGLRGPSGEPGIGQLGPKGDDGVPGYPGPKGQKGERGYPGLT
GVPGDSEQGKPGIPGMPGRPGDKGESGRPGIPGAKGERGDKGEIGGRCFDCLPGLPGEKG
DRGFDGLRGPPGFDGTPGEKGHQGERGLDGLPGVPGDPGSPGRPGLPGAPGPSGEKGENA
LVPSNMLKGQKGDKGDRGFPGRPGPAGLDGLRGFPGLDGPKGEAGLKGDRGMPGLPGVDG
SPGSPGRDGLPGIKGLSIKGEPGYSGRDGPKGDKGEAGYRGEKGNPGVCPPLDYSRGFKG
AKGDKGHKGEPGAMGLDGIPGEPGLQGLPGLKGNTGPFGPPGPVGPRGLPGPRGEKGLTG
QIGFPGQPGRDGLRGIPGLLGSKGQKGETGASVVGPPGPKGNPGPWGQKGDRGPTGERGL
DGLTGQVGYPGDKGEAGLPGTPGPPGFIGPKGEPGPEGPQGLPGPPGRPGMDGIKGEPGM
KGETGTPGLIGMPGLKGDRGVPGIEGQKGFQGPKGSPGLRGMPGQPGLPGLKGDKGELGL
PGLEGVPGAPGLPGPIGPPGQKGDMGPVGLTGLDGLPGRDGEKGDAGFTGPVGPKGEPGS
VSEKGQKGEPGPPGLRGVDGRDGFPGVPGAKGDAGIPGYGRPGLKGDKGDQGLSGRDGLP
GMQGEKGDQGFSGIRGLKGDKGNMGPPGIPGTPGIDGLPGQDGLPGPPGYTGEKGNKGER
GLPGFTGEKGDKGVFGVPGRDGAMGVKGDRGLTGEPGAPGPSIEIKGQKGEIGEYGLVGL
PGERGLPGLRGDQGFEGLKGDRGLTGPSGLPGMEGRPGEKGDRGLPGEVGEPGPVVKGEK
GLPGLPGKNGRDGLPGQPGEKGDKGFPGLIGPQGARGMPGLQGRQGEKGDRGLTGAPGRD
GIDGAPGLLGPKGDPGFPGPKGNMGMPGGPGLPGEKGDRGPQGMPGLNGFDGIKGDRGFP
GPEGPMGLVGMPGEKGLPGQRGLNGRDGLPGLKGDKGEPGLVPPPGPKGNPGRPGRDGEK
GDRGPPGPQGIQGLQGERGEKGDQGFPGLSGPQGLQGLRGEIGVAGPPGLDGRPGSPGPK
GDPGLACTHAPDYLSGILLVKHSQSEEIPQCEAGHVKLWEGYSLLYVDGNDYPHNQDLGS
PGSCVRKFSTLPVITCSNNNVCNYASRNDRSFWLSTTAPVPMMPVVEEDMRQYISRCVVC
EVPSNVIAVHSQTLDIPLCPAGWEGLWIGYSFLMHTGVGNGGGGQALSGPGSCLQDFRTT
PFIECNGGKGHCHYYDTQTSFWLVTVDDQQQFTRPQQDTLKAGRLLTRVSRCQVCIRN
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcccatacaggcggctcgtgacaattgcaacgattttattttgtgtggttgga
accagagcggactcgcgcagacgctacataaatcaaagacaattctggaatgatccgagc
agcggaggagtgggtctcttcagacgaccagactactatagatcgacaccggaacctgtt
caaccggaagtagacccaagttatgacatcattgacactgcaagtggacgtctacatgga
ccaaagagaaattgcacgagtagcggatgctgtatccccaagtgttttgcagaaaaaggc
aacagaggataccccggagtacctggtgtacccggtcccaaaggtgtccagggttttgct
ggggctgaaggattgattgggtccaaaggaatgaagggtgaacctggcccatcgggtcca
cgaggcccaaaaggtgatcgaggtgctcagggtagtcctggttttcccggtgcagccggt
tttcccggacataaaggagaagatggtcccccaggtattccaggaagagacggatgcaat
ggaacagacggtctgccaggtctccgtggtctcgacggtgtcccaggacctaggggtcta
ccaggtattcctggctcaaagggagacaaaggtgaaccagctgaactgaacattaactac
ctgaaaggacaaaagggtgaaactggatatgagggcagacccggtgaccctggtgagact
ggaccacctggaccaagaggacccgatggagcaccaggtatgcctggtataccaggaagt
aaaggttcaactggcccgaaaggagacaaaggtcaaggctgcatatcaattcaaggacca
cctggccctatgggtctgaaaggtgacaaaggtgaaaagggtgaaagtagtcctggagaa
gtagttggaccaccaattacaacaaccggccccaaaggtgacaggggttatccaggtgaa
aagggtgacgtcggtccaaaaggagaacaaggtgaacttggagcaccaggctttcctggc
gacagaggcccacaaggagagaaaggtcttccaggtcaacctggtcctagaggacgagat
ggaaattacggacctacaggacctcctgggcagaaaggtgatcgaggtaatgaaggtcta
agaggtttggatggaaagcctggacaaaagggtgagcctggagaatcaggtctacaaggt
gtgcccggtatggtgggaccgcctggtccaccaggtggtggtagaggttctccaggacca
ccaggccctgctggtccacgaggatacaggggattacctggaccaaaaggattagacggt
ctgaaaggtgaacaagggccacgtggtgtacctggtgccaaaggaggaccaggtatccca
ggacgtgtaggcatggaaggtttagctggagagaaaggtcaaaagggagaaggtggaata
attggaatgccaggtgttcaaggtcccagaggatttatcggacctccaggtgcagatgga
ttgagaggaccatcaggagagcctggtattggacaattaggtcctaagggagatgacgga
gtcccaggataccctggaccaaaaggacagaaaggagaacgtggctatcctggtctaaca
ggtgttccaggtgattctgaacaaggtaaaccaggtattcctggaatgccaggtcgtccg
ggtgacaaaggagaaagtggtcgtccaggaatacctggtgccaagggcgagcgcggagat
aagggtgagattggtggtagatgcttcgactgtttacctggtttacctggtgagaaaggt
gatagaggtttcgatggacttagaggtcctccaggatttgatggaactccaggtgaaaaa
ggtcaccaaggtgaaagaggattggacggtttgcctggtgtacccggagatccaggttcg
ccaggtcggccaggcttacccggtgcccctggaccaagtggagaaaaaggcgaaaatgcc
ttagtaccatcgaatatgctcaaaggacagaagggtgacaagggtgacagaggatttcca
ggtaggcctggacctgcaggtttggatggacttcgagggttccccggattggatggacct
aaaggagaggcaggactgaagggtgataggggtatgccaggtcttccaggcgttgatggt
tctccaggaagtccaggaagagatggattgcccggaattaaaggattaagcatcaaggga
gagccaggctacagtggtcgagatggtccaaagggtgacaaaggtgaagctggttatcga
ggagaaaagggtaatcctggagtatgcccaccacttgactacagcagaggcttcaaaggc
gccaaaggagataagggacacaaaggagaacccggagccatgggtcttgatggtatacca
ggagaaccaggtttgcaaggactaccaggattaaaaggtaataccggacctttcggacca
ccaggaccagttggtcctcgaggtttgccaggtccacgaggtgagaagggcttaacaggg
caaattggtttccctggacaacctgggagagatggtcttcgcggtatacctggattattg
ggatcaaagggacagaagggtgaaacaggtgcatcagttgtaggaccacctggaccaaag
ggtaatccaggaccgtggggtcagaagggagatcgcggtcctactggtgaaagaggatta
gacggattaactggacaagttggatatcccggagacaagggcgaagctggtcttcctggt
actccaggtccaccaggtttcattggaccaaaaggtgagcctggacccgagggaccacaa
ggattacctggacctcctggacgacctggtatggatggtattaaaggagaaccaggtatg
aaaggagagactggtactcctggacttattggtatgccaggactaaagggagaccgagga
gtgcctggaattgaaggacaaaaaggcttccaagggccaaaaggttcaccagggttgaga
ggcatgcctggacaaccaggtcttccaggactgaaaggagataaaggtgaacttggcttg
cctggtcttgaaggtgttccaggagcccctggcctgcctggtccaattggaccacctgga
cagaaaggagatatgggaccagtaggtctaactggattggatggtcttcctggacgagat
ggtgagaaaggagatgcaggattcacaggaccagtgggacctaaaggagaacctggatcg
gtatctgaaaaggggcagaaaggtgaacccggaccaccaggcttgagaggtgtcgacggc
agagatggcttccctggtgttccaggtgcaaagggtgacgccggtattccaggctatggc
cgcccaggtctcaaaggagataagggtgatcaaggtctaagtgggcgagatggtttgcct
ggaatgcagggtgagaagggtgatcaaggcttttcgggaatacgtggtctaaaaggtgac
aaaggaaacatgggaccaccaggaatacctggaacacccggtattgatggtttacctggt
caagatggtctgcctggtccaccaggttacactggtgagaagggtaacaagggtgaacga
ggtctgccaggatttactggtgagaagggagacaagggtgtctttggtgtacctggacgt
gatggtgcaatgggtgtaaaaggtgaccgaggtttaactggagaacctggagctccggga
ccttcaattgaaatcaaaggacagaaaggtgaaattggtgaatatggccttgtaggatta
ccaggagagagaggactgcccggtttgcgtggtgaccaaggttttgaagggcttaagggt
gatcgtggtctcacaggaccttcaggcttgcccggaatggaaggcagaccgggagagaag
ggtgataggggtcttcctggagaagtcggtgagcctggaccagtagtaaagggagaaaag
ggtcttcctggactgccaggtaaaaatggacgagacggtttacctggccaacctggtgaa
aagggagacaagggattccctggcttgattggtcctcagggtgcgcgtggtatgcccgga
ctgcaaggacggcaaggagagaagggtgatagaggacttactggtgcacctggacgcgat
ggcattgacggtgctcctggacttctgggtccgaagggtgatcctggtttcccaggccct
aagggtaatatgggtatgcctggtggcccagggctacctggtgaaaagggtgacagagga
ccacagggtatgcctggtctcaatggtttcgatggtatcaagggagatcgagggttccct
ggacctgaaggacccatgggtctcgttggtatgcctggtgagaagggtctgcctggtcaa
cgtggtctcaatggtcgagatggtttgccaggactgaagggagacaagggagaaccagga
ctggttcctccaccaggtcctaaaggaaatccaggtagacctggtagagatggtgagaaa
ggagatcgaggacctcctggaccacaaggtattcagggactacaaggcgaacgcggagag
aaaggtgatcaaggcttcccaggtttatctggacctcaaggcttacaaggacttcgtggt
gaaattggtgttgctggaccaccaggtttagatggtcgacctggatcacctggaccaaaa
ggtgatccaggattggcctgtactcatgctccagactacctatcaggtatcttgcttgtg
aagcacagtcaatcggaggagatacctcaatgtgaagctgggcatgttaaactatgggag
ggatactcactgctctatgtggatggaaatgactatccacacaatcaagacctaggatct
ccgggatcatgtgttaggaaattctctacactgccagtgatcacgtgctcaaacaacaat
gtctgcaattatgcctcacgcaatgatcgaagcttctggctgtctacaacagctcctgta
cccatgatgcccgttgtagaggaagacatgagacaatacatctcacgatgcgttgtctgc
gaggttccatccaacgttatcgccgtgcacagtcaaaccctagatattcctctctgccca
gcaggatgggagggtctctggattggctacagtttcctgatgcacactggcgttggtaat
ggaggaggaggtcaagccctatcgggtcctggatcctgccttcaggacttccgaacaaca
cctttcatcgagtgcaacggtggaaagggtcactgccactactacgacacacagaccagc
ttctggctcgtcaccgtcgacgatcagcagcaatttacgcgaccgcagcaagataccctc
aaggcgggtcgactgctaacgcgtgtttcgcgatgccaagtgtgtataagaaactaa
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integrated database retrieval system
