Phlebotomus papatasi: 129806562
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Entry
129806562 CDS
T10447
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
ppap Phlebotomus papatasi
Pathway
ppap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129806562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129806562
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129806562
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
129806562
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
129806562
NCBI-ProteinID:
XP_055711216
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All DBs
Position
3:5308564..5309413
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AA seq
205 aa
AA seq
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MDSKQDNKVIICVPGQRLCAADENTVAGHGTYERGGYIYTVLTGRVHIRKEKMTQFIEVK
PLGMETIVPTVGDVVTAKITVVNQRFAKCLIFCVGHKILNRNYRGVLKKEDIRAAERDSV
EVQKCFRPGDVILARVLPQTELHHYQLTTAENELGVVMAISKNDSSGVPMVPISWDEMQC
PETLIKEHRKVARVVSENNCLPSLS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggactcaaaacaggacaataaagtgattatttgtgttccgggtcagagattgtgtgct
gcggatgagaatacagttgctggacatgggacttatgagagaggaggctatatttacaca
gttttaaccggaagggttcatattcgcaaggagaaaatgactcagtttattgaagtcaag
ccactggggatggaaacaatcgttccaactgtcggagatgtcgtgacagccaagataacc
gtggtaaatcagagatttgcaaaatgcttgatcttctgcgttgggcacaaaattctcaat
agaaactaccgtggagtcctgaagaaagaggacatcagggcagcagaaagggacagcgtg
gaagttcaaaaatgcttccgtcccggagacgttatccttgccagagtgctcccacagaca
gagctgcatcattatcagctgacgacagcagagaacgaacttggagtagtgatggccatc
tccaaaaatgactcatccggagttccaatggttcccatcagctgggatgagatgcaatgt
ccagaaacactaatcaaagaacacagaaaggtagctcgggttgtttctgaaaataattgt
ctcccctcattgtcctaa
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