Phlebotomus papatasi: 129807019
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Entry
129807019 CDS
T10447
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ppap Phlebotomus papatasi
Pathway
ppap03013
Nucleocytoplasmic transport
ppap03015
mRNA surveillance pathway
ppap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129807019
09122 Translation
03013 Nucleocytoplasmic transport
129807019
03015 mRNA surveillance pathway
129807019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129807019
03041 Spliceosome [BR:
ppap03041
]
129807019
03009 Ribosome biogenesis [BR:
ppap03009
]
129807019
03012 Translation factors [BR:
ppap03012
]
129807019
Enzymes [BR:
ppap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129807019
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129807019
mRNA cycle factors
Stress granule specific factors
129807019
Spliceosome [BR:
ppap03041
]
Complex C
Other components
EJC/TREX
129807019
Ribosome biogenesis [BR:
ppap03009
]
Eukaryotic type
90S particles
Helicases
129807019
Translation factors [BR:
ppap03012
]
Eukaryotic type
Initiation factors
eIF-4
129807019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
TniB
UvrD-helicase
Utp25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
129807019
NCBI-ProteinID:
XP_055711939
UniProt:
A0A1B0DM43
LinkDB
All DBs
Position
3:58643199..58645141
Genome browser
AA seq
402 aa
AA seq
DB search
MAAARRGGVNTEDLSNVEFETSEDIEVVPTFNSMGLREELLRGIYAYGFEKPSAIQQRSI
LPIVKGRDVIAQAQSGTGKTATFSIAILQSLDTTIRETQVLCLSPTRELAVQIQKVILAL
GDFMNVQCHACIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIRRRVLRTRSIKMLVLDEA
DEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHG
DMPQKERDEIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcgcgtcgcggtggagtaaataccgaagatttgagcaatgttgagtttgaa
acaagtgaggatattgaggtggtgcccaccttcaattccatggggctccgggaggagctg
ctgcgtgggatttacgcctacggtttcgagaaaccatcggctatacagcagcgcagcatc
ctcccaatagtcaaaggacgcgatgtgattgcccaggcacagtctggtaccgggaaaact
gccacgttttccattgcaattctgcagagtttggatacaacaatccgggagacgcaggtt
ctctgcctatcgcccacccgggagcttgcagttcagatccagaaagtcatcctggctctg
ggggatttcatgaatgtgcagtgtcatgcctgcattggaggcacgaatctgggagaggat
atccgaaagctggactacggacagcatattgtgagtggaacaccgggaagggtgtttgac
atgatccgtcggcgagtgctgaggacacgctccatcaagatgctggtgctggatgaagcc
gatgagatgctgaacaagggcttcaaggagcaaatctacgatgtgtaccgatatcttcct
ccagcaactcaggtatgcctgatttcagccactctgccccatgagatcctcgagatgaca
tccaagttcatgactgaccccattcggatcctcgtgaagcgcgatgagttgacgttggag
ggcataaagcagtttttcgtggccgtggagcgagaagagtggaagtttgacactctgtgc
gatctctatgacactctcaccatcacccaggccgtgatcttctgcaacaccaagaggaag
gtggactggctgacggagaagatgcgtgaggccaatttcaccgtgagctccatgcacgga
gacatgccgcagaaggaaagagatgaaatcatgaaggagttccggtctggacagagtcgt
gtcctcatcaccacggacgtctgggcgcgtggtattgatgtccagcaggtgtctctggtc
attaactacgatctgcccaacaatcgtgagctctatatccatcgaattggtcgatccgga
cgctttgggcgcaaaggtgtcgccatcaatttcgtcaagagcgacgacatcaggattctc
cgggacattgaacagtactattccacgcagattgacgagatgcccatgaatgtggcagat
ctaatctaa
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