Phlebotomus papatasi: 129807270
Help
Entry
129807270 CDS
T10447
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ppap Phlebotomus papatasi
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppap03021
]
129807270
03036 Chromosome and associated proteins [BR:
ppap03036
]
129807270
Transcription machinery [BR:
ppap03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
129807270
Chromosome and associated proteins [BR:
ppap03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
129807270
SLIK complex
129807270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
DEAD
SLIDE
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
129807270
NCBI-ProteinID:
XP_055712393
LinkDB
All DBs
Position
3:complement(67497811..67522888)
Genome browser
AA seq
1811 aa
AA seq
DB search
MNQDKEDKSDSDNESSSENSKSESSSESESESDSGSSSSGSSQRSDGSKSESTVKTPLNQ
SKDDKSQNTSEEENTGKNSDEDEDEEEEEEEDSSDDDIYTNTRTGNREDYQNSEKSSPDD
DEDYKYRRKPPPKKRPPATKAPSRPKKKNNRWHSGTSESASESEEDATPYRRPVSSSKKR
PAKKRVKNANYSSDYSDSDEGGKRGGSRRAATTTVSYKEASDDEKTGSEDLIDVDYDESP
PADTEANKSETIERIIGRRDGRKGITGNQTTVYAIEDAGGDPNDEDDAGDECEKEEQYLI
KWKGWSHIHNTWESQESLKEQKVKGMKKLENYIKRERDIEIWRKNAGPEDIDYFECQMEL
QQELLKSYNNVDRIIAQTVRSDGGIDYYCKWESLPYAEATWEDASLVSRKWQQKISEFND
REGSKKTPSRHCKALKYRPKFHHLKTQPDFLGIDRDLILRDYQMDGLNWLILSWCKENSV
ILADEMGLGKTIQTICFLFYLFKVQSLHGPFLCVVPLSTMTAWQREFQLWAPEMNIVTYL
GDVQSREIIRQYEWSFSPSKRLKFNAILTTYEILLKDKTFLGCISWAALLVDEAHRLKND
DSLLYKALKDFDTNHRLLITGTPLQNSLKELWALLHFIMPTKFDTWEHFEREHGNAADKG
YTKLHSQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSIQKQYYKWILTKNFNALRKGVR
GSQSTFLNIVIELKKCCNHAVLIRPLEYEAQMTQEDAAQQLLRGSGKLVLLDKLLCRLRQ
TGHRVLIFSQMVRMLDILAEYLQKRHFPFQRLDGSIKGELRKQALDHFNAEGSTDFAFLL
STRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEEI
VERAKQKMVLDHLVIQRMDTTGRTVLDKASNSNTTPFNKEDLSAILKFGAEELFKDEQEN
DDDLVCDIDEILRRAETRDEAPTMAGDELLSAFKVASFAAFEEDKQQSPVDDNADDQHDG
DTKDWDDIIPEDFRKAVEEEEKNKEMEDLYLPPRRKTLHQLNQADDTGTGSYGGKKKRKR
QTDDSDDGSEASAEDRPTKKRGRPPSKEKILNFTDQELRRFIRSYKKFPAPLKRLEAIAC
DAELQEKPLAELKKMGELLRKRCVTFLDEHSKENDNDTNGVKKRGARAGFSVKFGGVSFN
ARTLMACEEELQPLDEMIPGSADERLKWVLDIKTRPANFDVEWRVEEDSKLLCGIYQYGI
GSWEAMKMDPSLGLSEKILSNDNKKPQAKHLQSRSEYLLKIIRKNVELKKGIMKQKRPRK
ARDATKIVSKEIVEHEDISSGDDKKNVKKEKRISETDTSVNNVEENSNGVKATVEKKTKM
KHQKESKKGKKKNSDGPMHFTANNEPRALVVLGDLDPSVFNECKEKMRPVKKALKALDNP
DQSLSTQEQVNHTRACLLSIGKQIDECLSHYRDPDKVKEWRSNLWYFVSKFTEFDAKKLF
KLYKHALKKNDDKTTDGTEANAKPSPSKGTKNDATNTNDSEVKKGSSSERKRERKDSKRR
HQQGPQQQSSGTSSGVNRTKDGRMDQKMEANTSNSVDGNRSEMDGVKRRLEEGECEPDGK
ETINYKRLNTDSRIRDKDDRKKWDDYNSGNDRIRNRRNSGCQLSPLMSLPRAAPISSVNQ
RVPMYPGDPRDTRLPYPDTSLEPRWNVRERFNDHKRYEYGRPPGGYHRDRDHRDRDRRID
KRSRYPSGHGNYGSGLYLPTGSYYQSPADMAPGYRDRYAPPGGGSIDWNRDREYVDYRRD
YDRRQPPANSQ
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggataaggaggacaaaagtgattctgacaatgagtcaagcagtgaaaatagc
aaaagcgaatcaagttcagaatctgagagtgagtcggattctgggagctcaagctcagga
tcaagtcagaggtcagatgggtcaaagagtgagagtactgttaagaccccattaaatcag
tccaaggatgataagtctcaaaatacgtccgaggaagagaatacgggcaaaaatagtgat
gaggatgaagatgaggaagaggaagaggaggaggattcaagtgatgatgatatctacaca
aatacccgcacaggaaatcgcgaagattaccagaattccgaaaaaagtagtcccgatgat
gatgaggactacaaatacagacgaaaaccacccccgaagaagagaccaccggctacgaaa
gccccaagtcgacccaaaaagaaaaacaaccgatggcattcaggtacatcggagagtgct
agtgagagtgaagaagatgctacaccatatcgtcgtccggtgagttcatccaagaagcgt
ccagccaagaagagggtaaagaatgccaactactcatcggactatagtgatagcgatgag
ggtggaaagcgtggtggttccaggagagccgccacgacaacagtgagctacaaggaggcg
agtgacgatgagaagactggatctgaagatttaatcgatgtggattacgatgagtctccg
ccagctgatactgaggctaataaatccgaaacaattgaacggattattggtcgtagggat
ggtcgtaagggtattacgggaaatcagacaacggtgtatgccattgaggatgctggtggt
gatcccaatgatgaggatgatgcgggagatgagtgtgagaaggaggagcagtatctgatc
aaatggaaaggttggtcacacattcacaatacgtgggagagtcaggaatcactgaaggag
caaaaagtcaagggtatgaagaaattggagaattatatcaagcgtgagagggatattgag
atatggcgtaagaatgctggtccagaggatattgactattttgagtgtcagatggaattg
cagcaggaattactgaagagttacaataatgttgatagaataattgcacagacggttaga
agtgatggtggtattgattactactgcaagtgggaatctctgccgtatgcagaagccaca
tgggaagatgctagcctagtcagccgaaagtggcaacagaaaatcagtgaatttaatgat
cgtgagggttcaaagaagaccccatcgagacactgcaaagcactgaagtatcgaccaaaa
ttccatcatctcaagacacaaccggattttcttgggattgatcgtgatctcatactgcga
gactatcaaatggatggtttgaattggttgatattgtcatggtgtaaggagaattcggtg
atattggcggatgaaatgggtctgggaaagaccattcagaccatctgttttctcttctat
ctcttcaaagtgcaatctctccatggaccatttctctgtgttgttccactgagtacgatg
acagcatggcagagagaatttcaactgtgggcaccggaaatgaatatcgtgacatacttg
ggtgatgtacaatcacgtgagattatacggcagtacgaatggtcattttcaccgtcaaaa
cgactaaaattcaatgcaattctgacaacgtatgaaattttgctgaaggataaaacattt
ttgggttgtatcagttgggctgctttactcgttgacgaggcgcatcgtttgaagaacgat
gactcgttgctgtacaaagcactcaaggattttgatacaaatcatcgactactcataacg
ggaacacccctacagaattctttgaaggaattatgggctctactgcacttcataatgcca
acgaagtttgatacatgggaacactttgaacgagaacatggcaatgcagcagacaaaggg
tataccaagttgcacagtcaacttgaaccatatattctaagacgtgtcaagaaggatgtg
gaaaagagtcttccggctaaggtggaacagatactgcgtgtggagatgacgtcaattcaa
aagcagtactacaaatggatactaacgaagaacttcaatgcattgcgaaagggtgtccgt
ggatcacagtcaacctttctcaatattgtcattgaattgaaaaagtgctgcaatcatgca
gttttgatacgtccacttgagtatgaggcacagatgacgcaagaagatgcagctcagcaa
cttctccggggatcagggaagctggtactgctggataaattgctgtgtcgactacgtcaa
actggtcatcgtgtactgattttctcacaaatggtgagaatgttggacattttggcggaa
tatctgcaaaagagacattttccctttcaacgtctcgatgggagtatcaaaggggaattg
cgtaaacaagcccttgatcacttcaatgctgagggatcgacagattttgccttcctcctg
tcaacccgagctggaggattaggtatcaacctcgctacagcagacacagtgattatattc
gattcagactggaatccacagaatgacctacaagcacaggccagagctcacaggataggt
cagaagaatcaagtgaacatctatcgattggtaacagcgaggagtgtagaggaagaaatt
gtcgagagggccaaacagaagatggttctcgatcatttggtaatacaacgaatggataca
acgggtaggacagttttggataaagcaagtaatagcaatacaacacccttcaacaaggaa
gatctctcggcaattctcaaatttggcgctgaagaactcttcaaagatgaacaggagaat
gatgatgatttggtgtgtgacatcgatgagattctcaggagagccgaaacaagggatgaa
gcaccaacaatggccggggatgaactcctgagtgccttcaaagtagcaagttttgcagca
ttcgaggaggataaacagcaaagtccagtagatgataatgctgatgatcaacatgatggt
gatacaaaagattgggatgatataattccagaagatttccgaaaggccgttgaggaggag
gaaaaaaataaagagatggaagatttgtatttgccaccgaggagaaagactctgcatcaa
ctcaatcaggcagatgacacaggaactggatcatatgggggaaagaagaagcgtaagcgt
caaactgatgattcagatgatggtagtgaagctagtgcagaagatcggcctacgaagaaa
cgtggaagaccaccgagtaaagagaagattctcaatttcacagatcaggaactgaggaga
ttcatcaggagttacaagaaattcccagcaccactcaagaggctagaggcaattgcttgt
gatgcagagctccaggagaaacctctggcggaattgaaaaagatgggtgagttgttgcgt
aagagatgtgttacatttctggatgaacattccaaagagaatgacaatgatacgaacggc
gtaaagaagagaggtgcacgagctggcttctcggtgaaatttggtggagtgtcattcaat
gcacgcaccttgatggcctgtgaagaggaacttcagccactggatgagatgattccaggt
agtgctgatgagagactcaaatgggttctggatataaagacacgtccggcaaattttgat
gttgaatggcgtgtggaggaagattcgaagcttctttgtggaatatatcagtatggtatt
ggatcgtgggaagccatgaagatggatccatcactgggattatctgagaagattttgtca
aatgataataaaaagccacaggcgaagcatttgcaatctcgttctgagtatcttctgaag
attattaggaagaatgtggaattgaagaagggtattatgaagcaaaagagaccaagaaaa
gctagagatgcgacaaagattgtgtctaaggagattgttgagcatgaggatatttcatcg
ggagacgataagaagaatgtgaagaaggagaagagaatctccgaaacggatacgagtgtt
aataatgtcgaagaaaattcgaatggtgttaaggctacagttgagaagaagacaaaaatg
aagcatcagaaggaatcgaagaagggtaaaaagaaaaattctgatggaccaatgcacttt
acagccaacaatgagccacgtgctcttgttgttctgggtgatcttgatccatcggtgttc
aatgagtgcaaagagaagatgcgtccggtgaagaaagccctcaaggctctcgataatccc
gatcagagtctaagtactcaggaacaagttaatcatacacgagcctgtcttctcagtatt
ggaaaacaaattgatgaatgtttatcacattatcgtgatccggacaaagttaaagaatgg
cgtagcaatttgtggtattttgtgtcaaaatttacggaatttgatgcaaagaaattgttt
aaattgtacaaacatgccctcaagaagaatgatgataaaacgaccgatggaacggaagca
aatgccaaaccatcacccagcaaagggacaaagaatgatgcaacgaacaccaatgactct
gaagtcaaaaagggatcgagttcagagaggaaacgcgagaggaaggatagtaaaaggaga
catcagcaaggtccacagcaacagagcagtggaacatcctcgggagtcaataggacgaag
gatgggagaatggaccagaagatggaagccaacacgagtaacagtgttgatgggaatagg
agtgagatggatggggttaagagacgcctggaggagggtgaatgtgaacctgatggaaag
gaaacgatcaactacaaaagactgaacacggattcaagaatccgcgataaggatgatagg
aaaaagtgggatgactacaactcaggaaatgatcgaataagaaatcggcgaaattcagga
tgtcagttatccccattgatgtcccttccacgagccgcccccatttcgtcggttaatcag
agagttcctatgtatccgggtgatccacgagatacacgacttccttacccagatacgtcg
ttggaacctcgttggaatgtcagagaaagatttaatgatcacaagagatatgaatacgga
agacctccgggaggatatcacagggatcgtgatcatcgcgatagagatcgcagaattgat
aaaagaagtagatacccatcaggacacggaaactacggaagtggtctctacctgccaaca
ggctcctattaccaatctccagccgacatggcgcccggctaccgggatcgatatgcccca
ccgggtggaggctcaattgattggaatagagaccgagagtatgtcgactaccgtcgagac
tacgacagacgacaaccgccggccaactcgcagtag
DBGET
integrated database retrieval system
