Phlebotomus papatasi: 129807791
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Entry
129807791 CDS
T10447
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ppap Phlebotomus papatasi
Pathway
ppap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129807791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppap03021
]
129807791
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129807791
Transcription machinery [BR:
ppap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129807791
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129807791
U7-dependent histone pre-mRNA processing factors
129807791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
DUF4457
Gp58
Motif
Other DBs
NCBI-GeneID:
129807791
NCBI-ProteinID:
XP_055713259
LinkDB
All DBs
Position
3:13825586..13831978
Genome browser
AA seq
687 aa
AA seq
DB search
MAGKRKADSQIPAEENDLLLIKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDAL
PFVDLIEPEEVDLLFISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWMLSDYIKV
SNISTEQMLYTEADLEASMEKIETINFHEERDVLGVRFWAYNAGHVLGAAMFMIEIAGVK
ILYTGDFSRQEDRHLMAAEIPSMRPDVLITESTYGTHIHEKREDRETRFTSLVQKIVTQG
GRCLIPVFALGRAQELLLILDEYWSQNPELQDIPIYYASSLAKKCMAVYQTYINAMNDKI
RRQIAVNNPFVFRHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFENWCTDAKNGVI
IAGYCVEGTLAKTILSEPEEILTMSGQKLPLNMSVDYISFSAHTDYQQTSEFIRLLKPRH
VVLVHGEQNEMSRLKSALQREYEAEQNTMISFYNPRNTHTVELHFKGEKTAKVMGSLAVK
RPENEQKLSGVLVKRDFKYHILAASDLSKYSDMSMSVVTQKQSLMWSGSMNTLRLLLERI
GGPGTVESTETEKKYRIFNCIDVQLEGKVIIMEWQATPVNDMFADTVLATLLQSDLCGTT
IKGTSGHKGDRTHFKECLVETLQDMFGEKSVPKMIRGDEFQVTVGGKKANVDLQKLEVAC
PEDEQMAKMIHTAVHKLYQSLVLGPGN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaaaaggaaagcagattctcaaattcctgcagaagagaatgatttgctcctc
ataaagccgctgggagctggtcaggaggtgggcaggtcctgcatcatgctagagttcaaa
gggaagaaaataatgctggattgcgggattcatccgggtctcagtggcatggatgccctt
ccatttgttgatctaattgagccagaagaggttgacttgctcttcatctcgcatttccat
cttgatcactgcggagctctgccttggttcctgcagaagacatccttcaagggtcgctgc
ttcatgactcacgccacaaaagccatctaccggtggatgttgtcagactacattaaggta
agcaacatttccactgaacagatgctgtacacagaggcagatctcgaggccagcatggag
aagatcgaaactatcaactttcacgaagagagggatgttctgggagtgagattttgggcg
tacaacgctgggcatgttctaggtgctgcaatgttcatgattgaaattgctggtgttaag
attctctatactggagacttctcgcggcaagaggatcgacatttgatggctgcggagatt
ccttcgatgcgtcctgatgtcttgataaccgaatcgacgtatgggacgcacattcatgaa
aagcgggaggatagggagacgagatttacatcgttggttcagaagattgtaactcaggga
gggaggtgtttgattccggttttcgctctcgggagggcgcaagagttgcttctgatttta
gatgaatactggagtcagaatcctgaacttcaggatattccgatctactacgcttcgtcg
ttggctaagaaatgcatggctgtctatcagacttacattaatgccatgaatgataagatc
agacgtcaaatagctgttaacaatccctttgtcttccgccacatttcaaatctcaaagga
attgatcattttgaagatataggaccgtgcgttgttatggcgtcaccgggtatgatgcag
agcggtctgtcgcgggaactctttgagaattggtgcacagatgcgaaaaatggcgtcatc
attgccggatactgcgttgaagggactctggctaagacaatcctttcggaacctgaggaa
atcctcacgatgtctggtcagaagcttcctctaaacatgtccgtcgactacatttccttc
tcggcccatacggattaccagcaaacaagcgaatttatccggttactgaagccgaggcat
gtggttcttgtccatggggaacagaatgaaatgagcaggttgaagtctgcgctgcagagg
gagtacgaggctgaacaaaatacaatgatttccttctacaatccgaggaatacgcacacg
gtcgagctgcactttaagggagagaagacggctaaggtaatgggaagcctggcagttaaa
cgaccggagaatgaacagaaacttagcggggtccttgttaagagggactttaagtatcac
atcttggcagcttcggacttgtcaaagtattccgacatgagtatgtctgtagtgacgcaa
aaacagagtctgatgtggtcaggttctatgaacacacttcggttgctgcttgaacgaatc
ggaggtccgggaacggttgagtccacggagactgagaagaagtaccgcatcttcaactgc
atcgacgtgcagttggaggggaaggtgatcatcatggagtggcaggcaacgccggtgaat
gacatgttcgccgacactgtcctagccactttgctgcagtcggatctctgtggaacgaca
atcaagggcacgtcgggtcacaaaggcgaccgtactcacttcaaagagtgcctcgttgag
acacttcaagatatgtttggagagaagtcggtacctaaaatgatccgtggggatgagttt
caggtgactgtaggtggaaagaaggctaacgtagatctgcagaagctggaagttgcctgt
ccggaggatgaacaaatggccaagatgatacatacggctgttcacaaactctatcagtct
ctggttctaggtccaggaaactga
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