KEGG   Phlebotomus papatasi: 129808071
Entry
129808071         CDS       T10447                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
ppap  Phlebotomus papatasi
Pathway
ppap03030  DNA replication
ppap03410  Base excision repair
ppap03420  Nucleotide excision repair
ppap03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129808071
   03410 Base excision repair
    129808071
   03420 Nucleotide excision repair
    129808071
   03430 Mismatch repair
    129808071
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppap03032]
    129808071
   03036 Chromosome and associated proteins [BR:ppap03036]
    129808071
   03400 DNA repair and recombination proteins [BR:ppap03400]
    129808071
DNA replication proteins [BR:ppap03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    129808071
  DNA Replication Termination Factors
   ELG1-RFC complex
    129808071
Chromosome and associated proteins [BR:ppap03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    129808071
DNA repair and recombination proteins [BR:ppap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     129808071
  Check point factors
   HRAD17(Rad24)-RFC complex
    129808071
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_14 AAA_22 AAA_11 RuvB_N DEAD AAA_assoc_2 nSTAND_NTPase5 ResIII AAA_lid_RFC1 AAA_16 AAA_7 AAA_19 AAA_5 AAA_30 RCF1-5-like_lid DUF815 ATPase_2 ABC_tran AAA_24 NPHP3_N Mg_chelatase Thioredoxin_6 T2SSE nSTAND3 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 129808071
NCBI-ProteinID: XP_055713727
LinkDB
Position
3:49262198..49263608
AA seq 332 aa
MIEDKKSKNLPWVEKYRPSTLNELISHEEIISTISKFIDEGQLPHLLFYGPPGTGKTTTI
LACIRKLYNPGEFNSMVLQLNASDDRGINIVRGQILTFASNRTIFSGGGVKLIILDEADA
MTNDAQNALRRIIEKYTDNVRFCIICNYLSKIIPALQSRCTRFRFAPLQPLQILPRLEHV
IQEEKVLATEDGKQALITLSGGDMRKVLNVLQSTWMAFKDVTEVNVYTCVGHPQKEDIKN
IMNWLLNVESFEETVREIKNLKTVKGLALQDIITEVHGFVHRMELPPRVLCMILIRLAEI
EERLAAGCNENPQLSSLVSIFHTARDLVTIEN
NT seq 999 nt   +upstreamnt  +downstreamnt
atgattgaagataagaaatcgaagaatttaccatgggtggaaaaatatcgtccatccacg
ctgaatgagttgatatcccatgaagaaattatttcaacaattagcaagttcatcgatgag
ggtcagttgcctcatttgctgttctacggaccccctggaactgggaaaaccacgacaatt
ttggcttgcatccggaaactgtacaatccgggagagttcaattccatggtgctgcagctc
aatgcatcagatgatcgtggcataaacatcgttcgagggcagattctcacctttgcctcc
aacaggacaatatttagtggtggtggtgttaagttgatcatcctcgatgaggcagatgca
atgacaaatgacgctcaaaatgccctccggagaattattgagaagtacacagataacgtg
agattctgcataatttgtaactatttgagcaagatcattcctgctcttcagtccagatgc
acaagattccgctttgcccctttgcagcccttgcagatccttccgcggcttgagcatgtc
atccaggaagaaaaagttttggcaacggaagatgggaaacaggcactaattaccctgtcc
ggaggagatatgaggaaggttctgaatgttctccaaagcacctggatggccttcaaggat
gttactgaagttaatgtgtacacttgcgtcgggcatcctcagaaggaagatatcaagaac
attatgaattggctgttaaatgttgaatctttcgaggaaactgtaagagaaattaagaat
ctcaagacggtaaagggactggctcttcaggacatcattactgaggttcatggctttgtt
catcgaatggagctgcctccgagggttctttgtatgattctcatcagattggcggaaatt
gaagagagattggctgccggatgcaatgaaaatcctcaactttcttccctggtctccatc
tttcatacagctcgtgacttggtaaccattgagaattga

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