Phlebotomus papatasi: 129808277
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Entry
129808277 CDS
T10447
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ppap Phlebotomus papatasi
Pathway
ppap03013
Nucleocytoplasmic transport
ppap03015
mRNA surveillance pathway
ppap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129808277
09122 Translation
03013 Nucleocytoplasmic transport
129808277
03015 mRNA surveillance pathway
129808277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129808277
03041 Spliceosome [BR:
ppap03041
]
129808277
Enzymes [BR:
ppap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129808277
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129808277
Spliceosome [BR:
ppap03041
]
Complex C
Other components
EJC/TREX
129808277
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129808277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
129808277
NCBI-ProteinID:
XP_055714092
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All DBs
Position
3:23231289..23242782
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AA seq
423 aa
AA seq
DB search
MADNDDLLDYEDEEQNDPVVAETAEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENHVYVLVMCHTRE
LAFQISKEYERFSKYMPTVKVAVFFGGLPIQKDEEILKSTNPHIVVGTPGRILALIRSKK
LNLKHLKHFILDECDKMLEQLDMRRDVQEIFRNTPHGKQVMMFSATLSKDIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALA
QLLTEQNFPAIGIHRGMVQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKILNEVQDRFDVNITELPDEIDLSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaatgatgaccttttggactacgaggatgaggagcagaatgacccagttgtt
gctgagactgccgaggcacccaagaaggacgtgaagggcacatatgtgtccattcacagt
tctggtttccgggactttctgctgaagcccgaaattctgcgtgccattgtcgattgcggc
tttgagcatccgtctgaagttcagcacgaatgcatccctcaggctgtcctgggcatggat
attctgtgccaggcaaagtcaggtatgggcaagacggcagtgtttgtcttggccacgctg
cagcagctggaaccaacggagaatcacgtgtacgtccttgtgatgtgtcacacgcgtgag
ctggcattccaaattagcaaggagtacgagcgtttctccaagtacatgccaactgtaaaa
gtggcagtgttctttggtgggctgcccattcagaaggacgaggagatcctcaagagtacc
aatccacacattgtggttggaactcctgggcgaatcctggctctcattcgcagcaagaaa
ctcaatctcaaacacctcaaacacttcatcctcgatgaatgcgacaagatgctcgagcaa
cttgatatgcgtcgagatgtccaggagatctttcgcaatacacctcatgggaagcaagtg
atgatgttttcggcgacactcagcaaagatattcgtccagtctgcaagaaattcatgcaa
gatccaatggaggtttatgtggatgatgaagccaagctgacgctccatggattgcagcag
cactatgtcaagttgaaggagaatgagaagaacaagaaactctttgaattgctggacgtc
ttggagttcaatcaggtggtgatttttgtaaagtctgttcagcgttgtatggctttggcc
caattgctgactgaacagaatttcccagcaattgggattcaccgtgggatggtgcaggag
gaacgtttgtcacgctatcagcagtttaaggatttccagaagcgaattctggtggcgaca
aacctttttggacgcggaatggacattgaacgagtgaatattgtcttcaattacgatatg
cctgaggattcagatacgtatttgcatcgggtggcaagagctggacgtttcggcaccaaa
ggattggccattacttttgtctctgatgaagctgatgccaagattctcaatgaggtgcag
gatcgctttgatgttaatatcacggaacttcccgatgagattgatctgtcttcttacatt
gaaggacgatag
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