Phlebotomus papatasi: 129809684
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Entry
129809684 CDS
T10447
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ppap Phlebotomus papatasi
Pathway
ppap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129809684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppap03021
]
129809684
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129809684
Transcription machinery [BR:
ppap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129809684
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129809684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_3
zf-CCCH_2
zf-CCCH_4
zf-CCHC_4
zf-CCHC_2
Nab2-like_zf-CCCH_
SNRNP27
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
129809684
NCBI-ProteinID:
XP_055715684
UniProt:
A0A1B0DBR1
LinkDB
All DBs
Position
1:90316042..90317518
Genome browser
AA seq
291 aa
AA seq
DB search
MDILIANVEHLEFKIERDLNEQYGALPLPFPGMDKSTAAVCQFFNGRDGMECDKGAACPF
RHIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDP
ESKIKDCPWYDRGFCRHGPHCRHRHVRRILCTNYLAGFCPDGKQCKYMHPRFELPPPPEI
PRDQLQKRAPTCHYCGELGHKASYCQKMPQEQREAVQRQDELRYRTMGYMNRGGFEEGQM
QGPPPRGPPKPLEEITCFKCGNKGHYANKCPKGHLAFLSHNPHAQHFGKKV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggatattttaatagcaaatgtggagcatttagagtttaagatcgagagggatctcaat
gagcagtatggagctcttccacttccctttcccgggatggacaagtccacggcggctgtt
tgtcaattcttcaatggaagggatggaatggaatgtgacaagggggctgcatgccccttc
agacacatccggggcgatagaacaattgtctgtaagcactggctgcgaggattgtgcaaa
aagggggatcagtgtgaattcctgcacgaatatgacatgacaaagatgcccgagtgctac
ttctattcccgattcaatgcttgccacaacaaagagtgcccatttttgcacattgatcct
gagagcaagataaaggattgtccgtggtatgacagaggattctgccggcatggaccccat
tgtcgccatcggcatgtccgtaggatcctctgtacgaattacctggcaggtttttgtcca
gatgggaagcagtgcaagtacatgcatccccgcttcgaactgcctccacctccggaaatc
cctcgggatcagctgcagaagcgcgctcccacgtgccattactgcggagaattgggccac
aaggcatcctactgtcagaagatgccacaggaacagcgtgaagctgtgcagcgacaggat
gagcttcgctatcgcacaatgggctacatgaatcgcggtggcttcgaggagggacaaatg
caaggtcctccgccccgagggccccctaagcccctggaagagatcacatgcttcaaatgc
ggcaacaaaggacactacgccaacaaatgccccaaaggtcacctcgccttcctctcccac
aatccccatgcccaacactttggtaaaaaagtctaa
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