Phlebotomus papatasi: 129810325
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Entry
129810325 CDS
T10447
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
ppap Phlebotomus papatasi
Pathway
ppap03008
Ribosome biogenesis in eukaryotes
ppap03013
Nucleocytoplasmic transport
ppap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129810325
03015 mRNA surveillance pathway
129810325
03008 Ribosome biogenesis in eukaryotes
129810325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129810325
03009 Ribosome biogenesis [BR:
ppap03009
]
129810325
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129810325
mRNA cycle factors
Stress granule specific factors
129810325
Ribosome biogenesis [BR:
ppap03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
129810325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
LRR_9
LRR_4
NTF2
LRR_8
UBA_8
Motif
Other DBs
NCBI-GeneID:
129810325
NCBI-ProteinID:
XP_055716692
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All DBs
Position
1:complement(80922753..80936093)
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AA seq
646 aa
AA seq
DB search
MSNMQKFRGGRGNRRFHQNNGERFQRYRDYDEHDDRGEFPNNFQRSPNKGRRVSFKTTGF
QKNRHRFSDETIRSILEEDDDMTTGGPSTYNRTQNRGSLPVRRRGSPIPRRGGFGGPQGK
RRSKLVAGTSGWYQVVIQHGHKFPKDVLFKQILNNIHPEIFVPHYFATEGNGCSFFVDEF
DTAEKLYRNNLVEMPSGETLTLKVYSSVPNVNVDGNLKERIKLAMAKRYNTQTRCLDLTK
FHADSDLTDIFVGLSRVSIMGAAVDVIAENVPELETLILTDNKIFALTHFDTLARRCVNL
KNLCLRNNKIQTMNTLDNLKALPLTELVLTGNPIKDKMPPRQYISEVRKRATKLLILDGE
TLPPQIGFDVSSEGVLPPVKASFLCDADGTRIVKPFLEQYFALFDSENRQPLLDAYHELA
SFTLTTYSPFDEIPERGLKPYSFNNRNILKCNFDRKRRFVKYGRLPVVSYLSELPQTQHD
PQSFGVDLTLCLPQMILLTITGIFKEKRKNQSQPLRSFQKSLLIVPCGSGFCIRNEMLHI
TDVTKDQTMGAFKSVTLTDIPVNPMHPPQAPVVPVTPIQAMPSTSGNTVDDIAKMHMVQA
MAQKSNMNLEWSRKCLEENNWDFDKAGYVFTEMNKLNKIPQEAFIK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacatgcagaagttcagaggtggtcgtggaaaccgaagattccaccagaataat
ggagaaagattccaaagatatcgtgattacgatgagcacgatgaccggggtgaatttccc
aataacttccagcgaagccccaacaaagggcgacgagttagttttaagactactggattc
caaaaaaatcgtcacagattctccgatgagaccatccggagtattctggaggaggacgat
gatatgactactggcggtccgtcgacctacaatcgcactcagaatcgaggatcacttccg
gtccgtcgacgtggatcaccaattccccgtcgaggtggctttggtgggccacagggaaag
cgtcgatcaaagctcgtggctggtacgtcaggatggtatcaagtagtcattcagcatggt
cacaaattccccaaggatgttctatttaaacaaatcctcaacaacattcatccagaaatc
tttgtgccccactattttgccactgagggcaatgggtgttcgttctttgtcgatgaattt
gacacagctgagaagctgtacaggaacaatttggtggaaatgccgtctggcgagacgcta
actttgaaggtgtacagcagtgtgcccaatgtcaacgtggatggtaacctcaaagagcgc
atcaagttggccatggcaaagcgctacaatacccaaacaaggtgtctggacctcacaaaa
ttccacgctgactcagatctcacagatatctttgtggggctgtctcgggtgtcaattatg
ggggcagctgttgatgtaattgctgagaatgtgcccgagttagagacgttgattctcaca
gacaacaagatcttcgcactcacacactttgacactctggccaggaggtgtgtcaatctc
aaaaatttatgtctgaggaataataagattcaaacgatgaacacattggacaatctgaag
gcattaccactgacggaactcgtactgactggtaatccgataaaagacaaaatgccccca
cgccagtatatcagtgaagtacggaaaagagcaacgaaattgcttatactggatggagaa
acacttccgccccaaattggatttgatgtgtcatcagagggagttttgccaccagttaaa
gcatcctttctctgcgatgcggatggaacgaggattgttaagccattcttggaacaatat
tttgcactctttgattcagagaatagacaaccattgctcgatgcatatcatgagcttgca
tcattcacactcacaacttattcacccttcgatgaaataccagaaagaggcttgaagccg
tattccttcaacaatcggaatattctcaagtgtaattttgacagaaagaggcgttttgtc
aagtacggccgtcttccggttgtatcctatttgtcagaactaccacaaactcagcatgat
cctcagtcatttggtgttgatcttacgctgtgtctgccccaaatgatactcctgacgatc
acagggatctttaaggagaagcgtaagaatcagtcccaacctctgcgttcgttccaaaaa
tcactccttattgtgccttgtggcagtggtttctgcatacggaatgaaatgctccatatt
actgatgtcaccaaggatcagacaatgggagcttttaagtcggtcacattgacggatata
ccggtgaatccgatgcatccaccacaggctcctgttgttccagtgacaccaattcaagcc
atgccaagtacttcgggcaatactgttgatgatattgccaagatgcatatggtacaggcg
atggctcagaagagcaatatgaatctggagtggagtcgaaaatgcttggaagagaataat
tgggactttgataaagctggatatgtatttacggaaatgaataagctaaacaaaatacca
caagaggcatttatcaagtaa
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