Pectobacterium parmentieri RNS 08-42-1A: A8F97_00095
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Entry
A8F97_00095 CDS
T04513
Name
(GenBank) choline trimethylamine-lyase
KO
K20038
choline trimethylamine-lyase [EC:
4.3.99.4
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
A8F97_00095
Enzymes [BR:
ppar01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.4 choline trimethylamine-lyase
A8F97_00095
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PFL-like
Gly_radical
Motif
Other DBs
NCBI-ProteinID:
AOR57315
UniProt:
A0A0H3I8V8
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Position
complement(22364..24868)
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AA seq
834 aa
AA seq
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MDNDTLAPDTAPFSLGNSIVNSGKIARQHGSKKSSADEAVAEQEALTPRMQRLRAHYLEA
RPSVSIYRAVAFTEVAKHNPGLPPILLRAKSFRRACETAPILIQDEELIVGHPCGKPRAG
AFSPDIAWRWVQDELDTMSTRPQDPFQISEEDKKTIREEIAPFWQGRSLDEVCEAQYREA
GLWAFSGETFVSDLSYHQINGGGDTCPGYDVLLFTKGMKGIKADAQAKLAELGMEDPAHI
DRIYFYKAAIETCDGVMAYASRIAAQARVLAAQETDASRRAELLMIADVNENVPANPPKT
LQEALQSIWTLESLFEIEENQTGISLGRVDQYCYPMYEADIQSGRLTREQALELLQMFIL
KCAELMWMSSESGAKYFAGYQPFINLTVGGQKRSGGDACNDLTYLIMDAVRFVKVYQPSL
ACRIHNQSPHEYMEKIVDVVKSGMGFPACHFDDSHIKMMLRKGFDFDDARDYCLMGCVEP
QKSGRIYQWTSTGYTQWPIAIEFVLNRGRMILFDRVQGLDTGDLSTLDTFEAFDRAVKAQ
IAHIIRLSAIGTVISQRVHRDVAPKPLMSLLVEGCMETGRDVTAGGAVINHGPGLIFSGL
ATYVDSMMAIRKLVYEDRQYTLEQMRDALLANFSGYDALHRDCLNAPKYGNDDNAVDPLA
LDITEWTERECRQYKMLYSTFSHGTLSISNNTPIGALTAASANGRLAWTPLSDGISPTQG
ADKKGPTASIKSVSKMNVESMNIGMVHNFKFLKGMLDTPEGRNGLITLLRTSSILGNGQM
QFSYVDDEVLRKAQQEPEKYRDLIVRVAGYSAYFVELCKEVQDEIISRTMIEKF
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggataatgacacgttagcaccagacacggcccctttctcactcggtaacagcatagtg
aatagcggaaaaatagccagacagcatggcagcaaaaaatcttccgccgatgaagccgtt
gcagagcaagaagcccttacgccacggatgcagcgtctacgcgcacactatttagaggca
cgtcccagtgtctctatttatcgcgcagtagcctttaccgaggttgcgaaacacaatcct
gggctgccccccattctgctacgtgcaaaatcctttcgtcgcgcctgtgaaaccgcccct
attctgattcaggatgaagaactgatcgtaggccacccctgcggtaaaccgcgtgccggc
gcgttctctcctgatatcgcctggcgctgggtgcaggacgaactggacaccatgagcacg
cgccctcaggacccgtttcagatctcagaagaagataaaaaaaccatccgcgaagaaatc
gcacccttttggcaaggtcgttcgctggatgaagtatgtgaagcacaatatcgtgaagcg
ggtctttgggcattcagcggagaaacgtttgtcagcgatctgtcttaccaccagatcaac
ggcggcggcgatacctgcccaggttatgacgtgttgctcttcacgaaagggatgaagggc
atcaaagccgatgcgcaggcaaagcttgccgaactgggtatggaagatcccgctcatatc
gatcgcatctatttctataaagcggcaattgaaacctgcgacggcgtcatggcctatgcc
agccgcattgcagcacaggcgcgagtgctggcagcacaggaaaccgacgcctcacggcgt
gcagaactcctgatgattgccgacgtcaacgagaacgtgcctgccaatccccctaaaacg
ttgcaggaagccctgcaaagtatctggacgctggagtctttgttcgaaattgaagaaaac
cagactggcatttcgctagggcgcgtcgatcaatactgctacccgatgtatgaagccgac
attcaatccggccgcctgacgcgcgaacaggcactggaactgctacagatgttcattctg
aaatgtgcggaactcatgtggatgtccagcgaaagcggcgcgaaatatttcgcgggctat
cagccgtttattaacctgacggtgggtgggcagaaacgcagtggcggcgatgcctgtaac
gatctcacctacctgattatggatgcggtgcgttttgtgaaagtgtatcagccttcgctc
gcctgccgaattcataaccaatcaccgcacgagtacatggaaaaaattgtcgatgtggtc
aaatccggcatgggtttcccggcatgtcacttcgatgattctcatatcaaaatgatgctg
cgcaaaggcttcgattttgacgatgcgcgcgactactgcctgatgggctgcgtagaacca
cagaaatcaggccgtatttatcagtggacgtcaacgggctatacccagtggcccatcgcc
attgagttcgtgttaaaccgtggtcgcatgatcctctttgatcgcgttcaagggctggac
accggcgacttgagcacgctagacacgttcgaggcttttgaccgcgcggtgaaagcccag
attgcacacatcatccgcctgtcggcaattggcaccgtgatcagccagcgtgtacatcgt
gatgtcgcccccaaacccctgatgtctctgctggtggaaggttgcatggaaaccggtcgg
gatgtcaccgcagggggcgcagtaatcaatcatgggcctgggctcatcttctctgggtta
gccacctacgttgattccatgatggccattcggaaactcgtctatgaagatcgtcagtac
acgctggaacagatgcgtgacgcgctgttagctaacttttcaggctacgacgcactgcac
agggattgcctgaatgccccgaaatacggcaatgacgacaacgccgttgacccgctcgcg
ctcgatatcacggaatggacagaacgcgagtgccgccaatacaagatgctctattccacc
tttagccacggcaccttgtctatctctaacaatacgcctatcggcgcattaactgcggcc
agcgcaaacggacgtctggcatggacaccgctctccgacgggatcagcccaacgcaaggg
gcagacaaaaaagggccgacggcaagcatcaagtctgtcagtaaaatgaatgtggaaagc
atgaacatagggatggtgcataacttcaaattccttaaaggcatgctggatacgccagaa
ggtcgcaacgggctgatcactctgctgagaacgtcctccattttgggcaatggtcagatg
caattcagctacgttgacgatgaggtgttgcggaaagcccagcaggaaccagaaaaatac
cgtgatttaatcgttcgcgtggcgggctacagcgcgtacttcgttgagctttgtaaagaa
gttcaggatgaaatcattagccgcaccatgattgagaaattctga
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