Pectobacterium parmentieri RNS 08-42-1A: A8F97_00140
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Entry
A8F97_00140 CDS
T04513
Name
(GenBank) dihydrodipicolinate synthase family protein
KO
K22397
2-dehydro-3-deoxy-D-pentonate aldolase [EC:
4.1.2.28
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar00040
Pentose and glucuronate interconversions
ppar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A8F97_00140
Enzymes [BR:
ppar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.28 2-dehydro-3-deoxy-D-pentonate aldolase
A8F97_00140
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHDPS
Asp_Glu_race
Calmod_bind_C
YbjQ_1
Motif
Other DBs
NCBI-ProteinID:
AOR57324
UniProt:
A0A8B3FE82
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All DBs
Position
34652..35569
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AA seq
305 aa
AA seq
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MGFITKFAGIIPPVSSIFTSDGLLDEAGMQRVIDSLIAAGVNGLFFLGTGGEFSQMSATE
RMALTEAVIRMVDRRVPVLIGVGSTNTREAVALSQHAETAGADAVVAINPYYWQITEENL
MGYYGAIATAVSLPVILYNFPKLTGQDLYPALVKRLADAHHNIVGIKDTIDSVAHLRDMI
TTVKAAHPDFAVFCGFDDHLLNTVLMGGDGAISASANFVPELSVGIYQALRNGEFAEAMD
MHKTILQLPRLYQIDSPFVNVVKEAMTLMGLDISTACLAPTQPLNNEQKAQVRQTLVDAG
VLSEK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggatttatcaccaagttcgccgggatcattccgccagtgtcgtcaatctttacgagt
gacggccttctggatgaagcaggaatgcaacgcgtgattgacagcctgatcgccgcaggc
gtgaatgggctatttttcctcggtacaggaggggaattttcgcaaatgtctgcgacagag
cgtatggcattgaccgaggctgtgattcgtatggtggatcgccgtgttccggtattgatt
ggcgtaggcagtacaaacacgcgtgaagccgtcgcgctgagtcaacatgctgagaccgct
ggtgcagatgcggttgtcgctattaacccctattactggcaaattaccgaagagaacttg
atgggctattacggcgccatcgccaccgctgtctcgctcccggtgattttgtacaatttc
cccaagctcaccggtcaggatctctatcccgctctcgtgaaacgtctggccgatgcacat
cacaacattgtcggtatcaaagacaccatcgattctgtggcgcatttgcgcgatatgatc
accacggtgaaggccgcccatcctgatttcgcggtgttctgtggttttgacgatcactta
ttgaatacggtgttgatggggggagacggggcaatctccgccagtgccaattttgtacct
gaactgtcggtcggtatctatcaggcgctgcgtaatggggaattcgctgaggcgatggac
atgcataaaacgattttgcaattgccgcgtctctatcaaattgacagtccatttgtgaat
gtcgtgaaagaagcaatgacgctaatggggctggatatttccacggcctgtttagcgccg
acacagccattaaataacgagcagaaagcacaggttcggcaaacgctcgttgatgcgggc
gtgttatcagaaaaataa
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