Pectobacterium parmentieri RNS 08-42-1A: A8F97_00760
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Entry
A8F97_00760 CDS
T04513
Name
(GenBank) translocation and assembly module TamB
KO
K09800
translocation and assembly module TamB
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppar02000
]
A8F97_00760
Transporters [BR:
ppar02000
]
Other transporters
Pores ion channels [TC:
1
]
A8F97_00760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AOR57448
UniProt:
A0A8B3FHF4
LinkDB
All DBs
Position
171239..175267
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AA seq
1342 aa
AA seq
DB search
MMDDKNDNNAPVAVTEEKVAQDNVPTTPARKGRWWKRIGIGIVAFLLLLVVGVGLLVGTT
PGLHLLLNTVARVVPGLDIASVSGGWRDLTLKNVSYEMPGVTVKSEEFHLSLALDCLRKS
QLCINDLSANRIDVVVDTNALPASEEPTTPSEPVTEISAPFPISLRQLVLNGVQVTVDDT
AISLGEFRTGMQWEGRSLTLLPTKISALLVALPKTPVNVLEDGKVTAAEMASVIKETAAN
VREAAEQGTSQTLHIDKVLEANNTVAAATTTTPIPTAKTDNASDKPAVPEKPLGERLSEL
FSKPLLADLPQFTLPLDLNIVEIHGEQLRLTGDQDILITNLFVQASTQQQHLRLDKLIVQ
SPQGGLNVRGEATLRDNWPVSLAANGVLNVEPLKGETLKLTVDGGLREQLNVALNLSGPQ
RAQLELQTKLAEAGLPLSLTLQTERVRWPLTGATQYQASNVRLRFNGKATDYALSLRGDL
SGADIPPATLLLDGKGNEQQFTLGRLRLAALQGNADLSALIDWSKAISWRSELQLNGINT
AKQWPEWPAKVDGKITTRGSVYGGSWQLQVPELRLDGNVKANKLAARGELRGNAAGQWTI
PTLNLALGRNQLNVKGDLSDKWQLDADINAPSLDGMLPGLAGRAIGTLKLRGNLREPQML
ADITASGLRWQAITISQVRVEGDVRSEQQIQGKLAVRLEALKQDGLNIALLTLDASGNEK
QHQLRLAMLGEPVAGQLALSGSFDRQEQRWRGTLNNTRFDTPVGEWRLAQDMALDYQNTQ
QKITIGTHCWRNPNAELCVPKAIEAGPSGQASIRLNRFDLAMLKPFLTEDTVLAGTFTGG
VDINWQAGQGLPQANVSLVGNGVSVRQQMQGNTLPIDFDTFTLNAGLDRGRAQLGWLMAI
RENGRFSGDIQVTDPQGRRNLGGSVTINNISLALLNPALSKGEKAAGMLNANLRLAGDAT
RPQIFGQMVLERLDIDGNWMPIDLTNGRLAVNFSGMSSTLQGFLKTNNGQLNLGGNADWS
RPDAWRARIAAKGQKLRVTIPPMARLDVSPDIVFEATPQLFALNGSVSIPWARIVVKDMP
ESAVAVSSDEVMLDAQRQPLKKASAAIPINSNLTIRVGNDVTLDAFGLAARLQGDLKMVQ
DERGLGLNGQIDIPSGRFKAYGQDLIVRKGLILFSGPPDQPILNIEAIRNPDNTANDVIA
GVRVTGMAATPKLEVFSDPAMSQQEALSYLLRGQGLDSGGADSSAMTSMLVGLGVAQSGQ
VVGKIGEAFGVSNLALDTQGVGDNSQVVVSGYVLPGLQVKYGVGIFDSLATLTLRYRLMP
KLYLEAVSGISQALDVLYQFEF
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgataaaaacgacaacaacgcaccagtagcggtgacggaagaaaaggttgcg
caggataatgtaccgacgacgccagcacgaaaaggacgctggtggaaacgcatcggcatt
ggcatcgtcgccttcttattgctgctggttgttggagtgggtctgctggtgggaaccaca
ccaggcctgcatctgctgctgaataccgtcgcgcgcgtggtgccggggctggatattgcc
agcgtgagcggcggctggcgtgatttaacgctgaaaaacgttagctacgagatgccgggc
gtaacggtaaaaagtgaagaatttcacctgtcgctcgcgctggactgtctgcgtaaaagc
cagttgtgtatcaatgacctctcggctaatcgcattgacgtggtggtggataccaacgcg
ttgccggcatcagaagaacctacaacgccttcagaaccggtcacagaaatctccgcgcct
ttccctatctctctgcgtcaactggtgctcaacggcgttcaggttaccgtcgatgatacg
gcgatttcactgggcgaattccgcaccggaatgcagtgggaaggacgctcattgacgttg
ttgccgaccaaaatcagtgcgctgctggtggccttgccaaaaacgcctgtcaatgtgctg
gaagatggcaaagtgacggcggctgaaatggcgtctgtcatcaaagaaacggcagcaaat
gtccgtgaagccgctgagcaaggcacctcacaaacgcttcacatcgataaagtgctagaa
gcaaataacacggtcgcggctgccacgacgacgacaccgataccaacggcgaaaacagat
aatgcctcggacaaacccgcggtgcctgagaagccactgggcgagcgcctcagcgaactg
ttctccaaaccgctgctggcggatttaccgcagttcacgctgccgctggatctgaatatc
gttgagattcacggtgaacaactgcggctgacgggcgatcaggacattttgattactaac
ctgttcgtacaggcgtcgacccaacagcagcatttgcgtctggacaagctgatcgtgcaa
tcgccgcagggtggattgaatgtgcgtggtgaggcgacgctccgtgataactggcccgtc
tcgctggcggcgaacggcgtattgaacgtcgagccgctcaagggtgaaacgctgaaactg
acagtcgatggcggtctgcgcgaacagttgaatgtagcgctgaacctctcagggccacag
cgtgcgcagttggagttgcaaaccaaactggcggaagccgggctaccgctgtcgttgacg
ctgcaaaccgaacgtgtgcgctggccgctaacgggggcaacacagtatcaggcgagcaat
gtaaggctgcgttttaatggcaaagcgaccgactatgcgctgtcgctgcgcggcgacctg
agtggggcagacattccccctgcaacgctgttgctggatggcaaaggcaacgaacagcag
tttacgctgggccgcttgcggctggctgccttgcagggcaatgccgatctgagtgcgctt
atcgactggagtaaagcgatcagttggcgtagtgagctacagttgaacggaatcaatacg
gcgaaacagtggcccgaatggcctgcgaaagtagatggcaagattacgacgcgcggcagc
gtctatggcggtagctggcagttgcaggtgccggaactgcggctagatggcaatgtgaaa
gcgaataagctcgccgccagaggtgaactgcggggtaacgcggcaggacagtggacaata
ccaacgctgaatctggcgctaggccgtaatcaactgaacgtcaaaggcgatctgagtgac
aagtggcagttggatgcggacatcaatgcaccgtcgctggatggcatgttgcccggtctg
gcggggcgcgccattggcacactcaaactccgcggcaatctgcgtgaaccgcagatgctg
gcggatatcacggcttctggtctgcgttggcaggcgatcaccattagtcaggtgagggtg
gaaggcgatgtgcgttctgagcagcagattcagggcaaacttgcggtgcgccttgaagcg
ctgaagcaggacggattgaatattgccctgttgacgctggatgccagcggcaatgagaaa
cagcatcagcttcggctggctatgctgggggaaccggtcgcggggcaattggcgctttca
ggtagcttcgatcgtcaggaacagcgctggcgtggcacgctgaacaatacccgtttcgac
actccagtgggggaatggcgtctggcgcaggatatggcgttggattaccagaatacacaa
cagaagatcacgatcggaacacactgctggcgtaatccgaacgccgagctttgtgtaccg
aaagcgattgaggccgggccgagcgggcaggcgagtattcgactgaaccgcttcgatctc
gctatgttaaaaccgttcctgacggaggataccgtgctggctgggacgtttactggcggt
gtggatatcaactggcaagcggggcaaggtctgccacaggcgaacgtgtcgctggtgggt
aacggcgtgagtgtgcgtcaacagatgcagggcaatacgctgccgattgattttgatacc
tttaccctgaatgccgggctcgatcgtggacgagcgcagcttggctggctgatggcgatc
cgggaaaacggacgctttagcggtgatattcaggtgaccgacccacaggggaggcgcaat
ctcggcggcagcgtcacgatcaataatatttcgctggcattgcttaaccctgcattgagc
aaaggagaaaaggcggcaggaatgctcaacgcaaacttgcgtctggcgggggatgccact
cgcccgcagatattcggccaaatggtgctggagcggttggatattgatggtaactggatg
cctatcgatctgactaacggtcggctggcggtgaacttcagcgggatgtcgtcaacgctg
caaggctttttgaaaacgaacaatgggcaacttaacctcggtgggaatgccgactggtcg
cggcctgatgcctggcgtgcgcgaattgccgcgaaaggccagaagctgcgggtgacgatc
ccaccgatggcgcggttggatgtttcgccggatattgtttttgaagctacgccgcagttg
tttgcgctaaacggctcagtcagcatcccgtgggcacggattgtggttaaagacatgccg
gaaagtgccgtggcggtgtcatcggatgaagtgatgctggatgctcagcgccagccgttg
aagaaagccagtgccgcgattccaattaacagcaatctgacgatccgcgtcggtaatgat
gtaacgctggatgcatttgggctggccgcgcgcctacagggtgacctgaaaatggttcag
gatgagcgcggattagggctgaacggccagatcgatattccgtccggccgttttaaagcg
tatgggcaggatttgatcgttcgtaaaggattgattttgttctctggcccgccggatcag
ccgatcctgaatatcgaagccattcgtaacccagacaacaccgctaatgatgttatcgcc
ggcgtgcgtgtcaccggtatggccgccacaccgaagttggaagtcttctccgatccggcg
atgtcacagcaggaagcgctctcttatctgttgcgtgggcaaggtttggacagtggtgga
gcagatagctcggcgatgacctcaatgttagtaggtttaggggttgcacaaagtggtcaa
gttgtgggtaaaatcggcgaggcctttggcgtaagtaatttagctctggatacacagggt
gttggcgataattctcaggttgtcgtcagcggttacgtccttccgggtctgcaagtgaaa
tatggagttggcatattcgattctttggcaacgttaacgctgcgttaccgcctgatgcca
aagctatacttggaagcggtgtctggaattagccaggcattagatgtgctctatcagttt
gagttctag
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