Pectobacterium parmentieri RNS 08-42-1A: A8F97_01055
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Entry
A8F97_01055 CDS
T04513
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar00900
Terpenoid backbone biosynthesis
ppar01100
Metabolic pathways
ppar01110
Biosynthesis of secondary metabolites
Module
ppar_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
A8F97_01055
Enzymes [BR:
ppar01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
A8F97_01055
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YgbB
DUF6630
Motif
Other DBs
NCBI-ProteinID:
AOR57507
UniProt:
A0A0H3I888
LinkDB
All DBs
Position
251921..252418
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AA seq
165 aa
AA seq
DB search
MRIGHGFDVHKFGGEGPLVIGGVRIPYTQGLLAHSDGDVVLHAVTDALLGAAALGDIGKL
FPDTDPAFKGADSRGLLREAWRRINEKGYQLGNLDVTIIAQAPKMAPHIPQMRVNLAEDL
QCHMDDVNVKATTTEQLGFTGRGEGIACEAVALLVKKETGEIVAW
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcggtcacggttttgatgttcataagttcggtggagaaggtccgctggtgatc
ggcggcgtgcgaattccttatactcaaggcctgctggcacattccgatggggatgtggtg
ttgcacgcggtgactgatgctctgttgggggccgccgcgctgggcgatattggtaaactg
ttccctgataccgatccggcttttaaaggtgcagacagccgtggcctgctgcgtgaagcc
tggcgtcgtatcaatgaaaagggctatcagctaggtaatctggacgtcacaattattgcg
caagcgccgaaaatggctccgcatatcccgcaaatgcgcgtgaatctggcggaagattta
cagtgtcatatggatgacgtcaatgtgaaagcgaccacgacagaacagttgggttttacc
ggccgtggcgaaggcattgcctgcgaagccgttgccttattggtgaaaaaagaaacgggc
gaaattgtcgcgtggtaa
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