Pectobacterium parmentieri RNS 08-42-1A: A8F97_02000
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Entry
A8F97_02000 CDS
T04513
Name
(GenBank) murein transglycosylase B
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppar01011
]
A8F97_02000
Enzymes [BR:
ppar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
A8F97_02000
Peptidoglycan biosynthesis and degradation proteins [BR:
ppar01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
A8F97_02000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLT_2
SLT
Glucosaminidase
LysG
Motif
Other DBs
NCBI-ProteinID:
AOR57684
LinkDB
All DBs
Position
458265..459335
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AA seq
356 aa
AA seq
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MRHLVRFLPLLVLLSACSTQPAPPPAEAPSGNPFKGGFLLEPAHNVHPLGGDFATNPATA
RFVDKMVLEHGFNRQQLHDVLVQAKSLDWVIRLMDKQAPTSRPPSGPNGAWNRYRNQFIT
PDNVQNGVAFWNQYQDALQRAQNIYGVPPEIIVGIIGVETRWGRVMGKTRIIDALATLAF
DYPRRADYFAGELETFLLMARKEGNDPLSLRGSYAGAMGYGQFMPSSFKNYAVDFDGNGH
TNLWDPVDAIGSVANYFKAHGWVKGAPVAVLANGQAPLLPNGFNTRYSLTELQAAGLMPQ
HSLAGYSEASLLRLDVGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGEAVGRAR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcatttggttcgttttctccctctgctcgttttgctctctgcctgtagcactcag
ccagccccccctcctgcagaagccccttcgggtaatcctttcaaaggcggtttcctgctt
gaacctgcacacaatgtccatccgctaggcggcgattttgcgactaacccagccactgca
cggtttgtcgataaaatggtgctggagcacggttttaatcgccagcaattgcatgatgtg
ctggttcaggcgaaaagtctggactgggtgatccgtctgatggataagcaagccccgaca
tctcgacccccttcagggccgaacggtgcctggaaccgctaccgtaatcaatttattacg
ccagataacgtgcagaacggcgtagcgttctggaatcaatatcaggatgcgctacagcgt
gcccagaatatttacggcgttcctcctgagatcatcgtcggtattattggcgttgaaacc
cgctggggcagagtaatggggaaaacgcgcatcattgatgcactggcaacgttggcgttt
gattacccgcgacgtgccgattactttgcgggcgaactggaaacctttctgctgatggcg
cgtaaggaaggcaacgatccgctcagcctgcgtggttcttacgctggtgcgatgggctac
gggcagtttatgccttcatccttcaagaattacgccgtggattttgatggcaacggacat
accaacctgtgggacccggtggacgcgattggcagcgtagccaattatttcaaagcgcac
ggctgggtgaagggtgcgcctgtcgcggtgctggcaaacggtcaggcaccgctactcccg
aacggttttaatacccgctactcgctcactgaacttcaggccgcagggttaatgccacag
cattcgctagcgggatacagtgaagccagcctgctgcggttggatgttgggacgggttac
caatactggtacggtttaccgaacttctacaccatcacgcgctacaaccacagcacgcat
tacgcgatggccgtatggcagcttggtgaagcggtaggccgcgcacgctaa
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