KEGG   Pectobacterium parmentieri RNS 08-42-1A: A8F97_02135
Entry
A8F97_02135       CDS       T04513                                 
Name
(GenBank) exonuclease
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
ppar  Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:ppar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppar03400]
    A8F97_02135
DNA repair and recombination proteins [BR:ppar03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     A8F97_02135
    Archaeal homologous recombinant proteins
     A8F97_02135
SSDB
Motif
Pfam: SbcC_Walker_B AAA_29 Death_MADD ABC_tran cobW AAA_21 SMC_N nSTAND3 KYNU_C NTPase_1 AAA_22
Other DBs
NCBI-ProteinID: AOR57711
UniProt: A0A8B3FCM8
LinkDB
Position
complement(505163..508846)
AA seq 1227 aa
MKILSLRLKNLNALKGEWKIDFTKEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR
LGLLSASQNDLMTRDTAECLAEVEFEVKGVGYRAFWSQRRARNVPDGNLQSPKAELALIE
GGKILCEKLNDKKEMITQLTGLDFGRFTRSMMLSQGQFAAFLNAKADDRAELLEELTGTD
IYGLISEHVYDKHKQANIALSTLQARASGIQLLTDEQRQQVEVQLAELTQQEQQGNIERE
QALTTLRWFEQLTRQQTQLTNTQLQHASAESAIQQAKPQLDRLANGEPAEKLRPLHQERE
RYRQESLALTQQIEQLSGKQASEHTALTTLRQQEEKAEQGVIQHKQVQQQQELLINEQVV
PLDHRIATLQQQKNQQQDELAKTQLRLQADESKQTQIAAQQQQAKQLLEQIQAYRQQHAH
HQQWGEQLPLWRTQFLQLRQLQDEQQKLSQKQTQHTEQAAALQQEAATLTAQQHEQQTVV
DAARQQFIQHDEMRKNQEAHQPLAALRQRFNQLIDQQATRRQLATASDQFQRLHTRKQQH
LARQDEIQGHISQSEILRKQQQSDHEQRSQHLADLEMLYRQEERIVKLEAERQRLQAGEA
CPLCGSTEHPAIERYQALQPSETQKRLTARQQDVKQLTTALANTTAQLASLGQQREQLQQ
EIAQLDSEHQILLQQWQDVSERLQVNYTLEQQNETAAWLTQRETEEQDIRQHITAHEQLQ
KQWQESKDSLTVAEALQRELDQKTVLNTQQRTSLNDMQADTLQSQQNTQQRLAQHTQEIT
QTLANTNLPLPEATAQDDWLAQRDSEWQIWKTKEQDQSRLIPRLATLESDLQYLSHSVTE
TTQQLQAQQQQLEQRTALLNTNQQERLTLFGDRQIAAVREQLQRTSQQYDNALRLAQLAR
QQAETTLSRLTGELTRTQQQYEQSMHQRDSATERFTQALQQSAFADETTFLNALLAEQER
QTLQVWKEKLYQSLQQAAALHQQAERELLAHQQKRPTSLLEDATQEAVQQQLATLDETLH
FTVRQQGEIQRQLNDDRQQRQNQQDLLNEIAQSQQKYDDWSCLNTLIGSQSGHKFRKFAQ
GLTLDHLVYLANLQLSRLHGRYMLKRKPGDDLELLVVDTWQADAERDTRTLSGGESFLVS
LSLALALSDLVSHKASIDSLFLDEGFGTLDAETLDIALDALDNLNASGKTIGVISHVDAM
KERIPVQIKVQKVNGLGVSKLAPQYAV
NT seq 3684 nt   +upstreamnt  +downstreamnt
atgaaaattctcagtctgcgcttaaagaatctcaacgcgctgaaaggcgaatggaagatc
gacttcacaaaagagccattttccagcaacggcttgtttgccattaccggcccaaccggc
gcaggaaaaaccacgctgttggatgccatctgtctggcgctgtaccatgaaacacctcgc
ttgggtctgctttccgccagccaaaatgatctgatgacccgcgacacggcagaatgtctc
gccgaggtagaatttgaggtgaaaggcgtgggataccgcgccttctggagccaacgtcgg
gcgagaaatgtcccagacggcaatttacagtcccccaaggccgagctcgcactcattgaa
ggcggcaaaatcctgtgtgaaaagctcaatgataagaaagagatgatcacacaactcacc
gggttagactttggccgtttcacacgttctatgatgctgtcgcaggggcagtttgccgcc
ttcctcaatgcgaaagccgacgaccgggcggaactgctggaagagctaaccggcacggac
atttacggcctgatttccgagcacgtctatgacaagcacaaacaggcaaacatcgcgttg
agcacgctacaggcacgcgcatcaggtattcagttgctgaccgatgagcagcgccagcag
gtggaagtccagcttgccgaactgacccagcaagagcaacagggcaacattgagcgtgag
caagcactgactacgctacgctggtttgagcaactgacgcggcagcaaacacagctcacc
aacacgcagttgcaacacgcaagtgccgaatccgccattcagcaggccaagccgcagctc
gacaggttagccaacggcgaaccagcagaaaaactgaggccgttacatcaggaacgagaa
cgttatcgacaggaatcccttgcgctcactcagcagattgaacaactgtcaggaaagcag
gcctctgagcacactgcgctgacaacgttacgccagcaggaagagaaagcagagcagggc
gttattcagcacaaacaggtgcagcagcagcaagagttattgatcaatgaacaagttgta
ccgcttgaccatcgtattgccacgctgcaacagcaaaaaaaccaacagcaggacgaactg
gcaaaaacacagcttcgcctacaagctgacgaaagcaaacaaacgcagatagcagcgcaa
caacagcaggccaaacaactgcttgaacagattcaagcttatcgccagcaacacgcacat
catcagcagtggggagaacaacttcccctgtggcgtacacagtttctgcaattgcgccag
cttcaggacgagcagcagaagctgagccaaaagcagacgcaacacaccgaacaagcggca
gcgctccaacaggaggctgcaacgctgacggcgcagcagcatgaacaacaaacggtcgtt
gatgcagcccgtcagcaattcatacaacacgatgaaatgcggaaaaatcaggaagcgcat
cagccgcttgcagctctacgccagcggtttaatcaactcatcgatcaacaagccacacgc
cggcagctcgcaacagccagcgaccagttccagcgccttcatacgcgtaagcagcagcac
ctcgccaggcaagacgagatacaagggcatatcagccaatcagaaatattacgaaaacag
cagcagtctgatcatgagcagcgcagccagcatttggccgatctggaaatgctgtaccga
caggaagaacgtatcgttaaactggaagccgaaaggcagcggctacaggccggagaagcg
tgccctctgtgcggctcaaccgagcatccagcgattgaacgctatcaggcgttacaaccg
tctgaaacccaaaagcgcctgacggcacgacagcaggacgtgaaacagttaacaacggcg
ctggcgaatacgaccgcacaactcgcctcgctggggcagcagcgggaacagttgcaacaa
gagatcgcacaactcgatagcgaacatcaaatcctgctgcaacagtggcaagatgtcagt
gagcgcttacaggttaactacacgttggaacagcagaatgaaaccgcagcctggcttacg
caacgcgagaccgaggagcaggacattcgacagcacattaccgcacacgagcagttgcaa
aaacagtggcaggaaagtaaggattcactgacggttgcagaagccctacagagggaactg
gatcagaaaactgtgctgaatacccagcaacgaacttcgctaaacgatatgcaggcagat
acccttcagtcgcagcaaaatacgcagcaacggctcgcgcagcacactcaggaaatcacg
cagacgctggcaaacacgaatctgcctcttccggaagccactgcacaggatgactggttg
gcacagcgcgacagcgagtggcaaatatggaaaaccaaagaacaggatcaatcccgctta
attccccggttagccacgctggaaagcgatcttcagtatctgagccacagcgtgaccgag
acaacgcagcaattacaggcgcagcaacagcaactggagcagcgcaccgctctgctcaat
acgaaccagcaggaacgactgacgcttttcggcgacaggcaaatcgccgcagtacgcgag
cagctacaacgaactagccagcaatatgataatgcgcttcggttagcgcaattagcacgt
cagcaggctgaaaccacgttgagccgcctgacgggagagctaacccgcacgcaacagcag
tatgagcagagcatgcatcaacgcgatagtgcgactgaacgattcactcaggctttgcag
caaagtgcttttgctgatgaaaccaccttcctgaatgcgctgcttgctgagcaggaacga
cagaccttgcaggtatggaaggaaaagctgtatcagagtttgcagcaggcagcagcactt
caccagcaggctgaacgggagctgctcgcccatcaacaaaagcgaccaacttctctgctg
gaagatgccacacaagaagcagtacagcagcagttggcaacgctggatgaaacgctgcat
ttcactgtgcggcagcagggagaaattcagcgtcaactgaacgacgatcgacaacagcgt
caaaatcagcaggatttgctcaatgagatcgcccaaagtcagcaaaagtatgacgactgg
agctgtcttaatacgctcatcggctcacaaagtgggcataaattccgtaagtttgcccag
gggctcaccttggatcatctggtttatctcgccaatctacagctctctcgtctgcacggg
cgctatatgttgaagcgaaaacccggtgacgatctggaactgctggtggtggacacctgg
caagcagacgccgaacgcgatacgcgcacgctgtccggcggcgagagctttctggtgagt
ctatcgctggcgctggcgttatccgatctggtcagccataaagccagcatcgactctctg
tttctggatgaaggcttcggcacgctagatgccgagacgctggatatcgcgctggatgcg
ctggataacctgaacgcctctggcaaaaccatcggcgtcattagccatgtcgacgccatg
aaggagcgtattccggtacagatcaaagtgcagaaggttaacggtctgggcgtcagcaag
ctagcaccgcagtatgccgtgtag

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