Pectobacterium parmentieri RNS 08-42-1A: A8F97_02140
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Entry
A8F97_02140 CDS
T04513
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppar03400
]
A8F97_02140
DNA repair and recombination proteins [BR:
ppar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A8F97_02140
Archaeal homologous recombinant proteins
A8F97_02140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AOR57712
UniProt:
A0A8B3FGA5
LinkDB
All DBs
Position
complement(508843..510069)
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AA seq
408 aa
AA seq
DB search
MRIIHTADWHLGQYFYTKSRAAEHQAFLHWLIIQVEQHHVDAIIVAGDIFDNGSPPSYAR
EMYYSFVVELQHTGCQLIILGGNHDSVATLNESRDLLACLNTRVIACASDDPAQQVLLLE
NRQQQPGALLCAIPYLRPRDVLTSKAGQSGDEKQLALQEAITAHYQQCYQLACQKRDELG
LPLPIIATGHLTTIGVTASESVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQRVTKSDH
IRYSGSPIPLSFDELGSEKSVCLVSFIPDAPPKIDTLPIPVTQPMQLIKGSLSDIEQQLA
TFQNYQGDKPVWLDIELNTQDYLSDMQKRIQAMTEHLHVEVLLLRRTREQRLQAITRQDK
ETLNELSVHDVFERRLATEKDMENGRQQRVRTLFNQVINELENSEPAK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattatccacaccgccgattggcatttagggcaatatttttataccaaaagtcgc
gccgctgaacatcaggcgtttcttcactggttgatcattcaggtagagcaacatcacgtc
gatgccattatcgtagctggcgatatcttcgataacggctcgccccccagctatgcgcgt
gaaatgtattatagctttgtagtagaactacagcacacaggctgccagctcatcattctt
ggcggcaaccacgactctgtcgccacgctgaacgagtcgcgagatttgctggcctgtctg
aacacgcgggtgattgcctgcgccagcgacgatccagcccagcaagtgcttctgctggaa
aaccgccagcagcagcccggcgccctgctctgcgccattccctatttgcgcccacgtgat
gtgctaaccagcaaagccggacaatccggtgatgaaaaacagctagcactacaggaagcg
attaccgcgcattatcagcagtgttatcaactggcttgccagaagcgagacgagcttggt
ctgccgctaccgattattgcaaccgggcatctgacgacgattggcgtaaccgcctcggaa
tccgtgcgcgatatctatattggcaccctcgatgctttccctgctcaggctttcccgcct
gcggattatatcgctttggggcatattcaccgcccgcagcgcgtgactaaaagtgatcac
attcgctatagcggctccccaatcccactgagttttgatgaactcggcagcgaaaaatcc
gtttgtctggtcagctttatacccgatgcaccgccgaagatagacacgctgcctattccc
gtgactcaaccgatgcagttgattaaaggcagcctgagcgatattgaacagcaactggcc
accttccagaactatcagggcgataaacccgtgtggttggatatcgagctcaacacgcag
gattatctgagcgacatgcaaaaacgcattcaggcgatgacagaacacctgcacgttgag
gtactcctgctacgccgcacgcgcgaacagcgtttgcaggctattacccggcaggacaag
gaaacgctgaacgaattgagcgtacatgacgtttttgaacgtcgtctggcaacggaaaaa
gacatggaaaacggtcgccaacagcgcgttcgcacgctgtttaatcaggttattaatgaa
ctagaaaatagcgaacctgccaaatga
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