Pectobacterium parmentieri RNS 08-42-1A: A8F97_02825
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Entry
A8F97_02825 CDS
T04513
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppar03000
]
A8F97_02825
Transcription factors [BR:
ppar03000
]
Prokaryotic type
Helix-turn-helix
LysR family
A8F97_02825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
EcoRI
Motif
Other DBs
NCBI-ProteinID:
AOR57847
UniProt:
A0A8B3FC40
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All DBs
Position
668873..669772
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AA seq
299 aa
AA seq
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MNLSIKQLRAFIALTETDNFTRAAQKINLSQPAFSSLIAGLEEEVGYRLFDRDTRKVQLN
ADGLHFIEIARRLVQTHDDAVGEIKSYATGYKGKIVLAVLPSMAVEWLPQVLTQYHRAYP
KIKVELLDTQWDRCLKAVLDGHADLALTAGQPSPGTFSSRMLFADSFYLICHNQHPLAQR
ANVDVVDVVQYPFVGFCKGTSIRQYTDQLIEPEGFNYVLEVRQLTTMMGLVAANYGVSIV
TGLTLFQFQHKDIAIIPFRDLSLQRGIYLVTDKERQLSVCAKEFYDFLLERAESFVPAT
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacttatcgataaaacaattacgggcctttatcgcgttgacagaaactgataatttc
acgcgtgccgcccagaaaataaatctctctcagcctgcatttagttcattaattgccggg
ttagaggaagaggtcggctatcggttatttgaccgtgatacccgtaaagtgcaactcaat
gctgatgggctccatttcattgagattgcccgtcgtctggtgcaaacccatgatgatgct
gtcggtgagatcaagtcttatgccaccggctataaagggaaaattgtgttggcggtactg
ccgtcaatggcggtggaatggttgcctcaggtattgacgcagtatcaccgggcttacccc
aagattaaggtcgagctgttggatacacagtgggatcgttgtctgaaagcggtgctggat
ggtcacgccgatctggcgctgacggcagggcagccatcgccgggaacgtttagctcccgc
atgctgttcgccgatagcttctatctgatctgccataaccagcacccgctggcacaacgc
gctaatgttgatgtggttgatgtggtgcagtatccgtttgttgggttttgcaaaggcacc
agtatccggcagtacaccgatcagcttatcgaaccggaaggctttaactacgtgctggaa
gtgcgtcagttgaccacaatgatggggctggtggcggcaaattatggtgtgagtattgtt
acggggctgacgctgttccagttccagcacaaagacattgcgattatcccgtttcgggat
ttatcgttgcagcgcggtatctatctggtgacggataaagaacgccagctttcggtgtgt
gcgaaagagttttatgattttcttctggaacgggcggaaagttttgttcccgctacgtga
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