Pectobacterium parmentieri RNS 08-42-1A: A8F97_02885
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Entry
A8F97_02885 CDS
T04513
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar00550
Peptidoglycan biosynthesis
ppar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A8F97_02885
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppar01002
]
A8F97_02885
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppar01011
]
A8F97_02885
Enzymes [BR:
ppar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
A8F97_02885
Peptidases and inhibitors [BR:
ppar01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
A8F97_02885
Peptidoglycan biosynthesis and degradation proteins [BR:
ppar01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
A8F97_02885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AOR57859
UniProt:
A0A0H3I8L5
LinkDB
All DBs
Position
complement(677537..678748)
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AA seq
403 aa
AA seq
DB search
MNTVNTSRFTKRTALGALLVISASSFAYAEDINLKTMIPGVPQIDAESYILIDYNSGKVL
AEMNADTRRDPASLTKMMTSYVIGQAIKSGKISPNDIVTVGKDAWATGNPTFQGSSLMFL
KPGDRVPVSQLNRGIILQSGNDACVAMADYVAGSQDAFVNLMNGYVKALGLQNTNFETVH
GLDAPGQFSSARDMALIGQALIRDVPEEYATYKEKEFTFNNIRQPNRNGLLWDSSLNVDG
IKTGHTSSAGFNLVASATEGQMRLISAVLGGRNAKGRESESKKLLTWGFRFFETVAPLKA
GKEFASEPVWFGDSDRVALGVEKDAYLTIPRGRMKDLKASYVLDNTELHAPLAKNQVVGS
INFQLDGKTIDQRPLVVMNEVKEGGIFGRMIDYIKLMFHHWFG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgtaaacacgtctcgttttactaagcgtactgcgcttggcgcactgctcgtc
attagtgcctcttcctttgcctatgccgaagatatcaatcttaaaacgatgatccccggc
gtcccgcaaatcgatgctgaatcctacatcctgattgattacaactctgggaaagtgttg
gcggaaatgaatgccgacacacgccgcgatccggccagcttaacgaaaatgatgaccagc
tacgttattggtcaggcgattaaatcaggaaaaatcagcccgaacgacatcgttaccgtc
ggtaaagatgcctgggcaaccggcaacccgaccttccaggggtcttccctgatgttcctg
aagccaggcgaccgtgttcctgtttcccaactcaatcgcggcattatcctgcaatccggt
aacgatgcctgcgtcgcgatggccgactacgttgctggcagtcaggatgctttcgttaac
ctgatgaatggttacgtgaaagcgctggggctgcaaaacaccaattttgaaactgtgcac
ggtcttgatgcgccgggtcagttcagttcggcgcgtgatatggctttgatcggtcaggcg
ctgatccgcgatgttccagaagagtatgcaacctacaaagagaaagagttcacattcaac
aatatccgccagcctaaccgtaacggcttgctgtgggattccagcctgaatgttgacggc
atcaaaacgggccatacgtcatcagccggcttcaatctggtcgcctcagcaacagaaggt
cagatgcgcctgatttcagcggtactgggtggacgtaatgccaaagggcgagagtcagaa
agtaaaaaactgctgacctggggcttccgcttctttgaaaccgtcgcgccgttaaaagcc
ggtaaagaatttgcgtctgagccagtctggtttggcgacagtgaccgcgttgcattgggt
gtagagaaagatgcctacctgaccataccgcgcggccgcatgaaagatctgaaagccagc
tacgttctggacaacacggaactgcacgcaccgttagccaaaaatcaggttgtgggctcc
atcaacttccagttggatggcaaaaccatcgatcagcgcccgctggtcgtcatgaacgaa
gtgaaagaaggcgggatctttggccgtatgatcgattacatcaaactgatgttccaccac
tggttcggctaa
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