Pectobacterium parmentieri RNS 08-42-1A: A8F97_03160
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Entry
A8F97_03160 CDS
T04513
Name
(GenBank) succinate dehydrogenase, cytochrome b556 subunit
KO
K00241
succinate dehydrogenase cytochrome b subunit
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar00020
Citrate cycle (TCA cycle)
ppar00190
Oxidative phosphorylation
ppar00650
Butanoate metabolism
ppar00720
Other carbon fixation pathways
ppar01100
Metabolic pathways
ppar01110
Biosynthesis of secondary metabolites
ppar01120
Microbial metabolism in diverse environments
ppar01200
Carbon metabolism
Module
ppar_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppar_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppar_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A8F97_03160
00650 Butanoate metabolism
A8F97_03160
09102 Energy metabolism
00190 Oxidative phosphorylation
A8F97_03160
00720 Other carbon fixation pathways
A8F97_03160
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Gene cluster
GFIT
Motif
Pfam:
Sdh_cyt
Fumarate_red_D
Motif
Other DBs
NCBI-ProteinID:
AOR57907
UniProt:
A0A8B3G0S7
LinkDB
All DBs
Position
732741..733130
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AA seq
129 aa
AA seq
DB search
MGKSVKKQRPVNLELQTIQFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSEEGFLR
AAEIMDSFIVKFIVWGILAALAYHIVGGLRHLLMDFGYIEEDLAAGKRSANISFIITVVL
SILAGVLVW
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaaatccgtgaaaaaacaaagacctgtcaatctggaattgcagacgattcagttc
cccgttactgcgatagcatctattcttcaccgcgtctccggcgttatcacctttgtcgct
gtcggtattttactgtggctgttaggcacttctctttcttcagaggaagggttcctacgc
gccgcggaaattatggatagtttcatcgtcaagtttatcgtctggggcatcctcgctgcg
ttggcttatcacattgttggtggtttacgtcacctgttgatggattttggctatatagaa
gaagaccttgccgcaggtaagcgttctgcaaatatttcatttattattactgtcgtgctt
tcaattctggctggagtcctcgtatggtaa
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