Pectobacterium parmentieri RNS 08-42-1A: A8F97_03170
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Entry
A8F97_03170 CDS
T04513
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar00020
Citrate cycle (TCA cycle)
ppar00190
Oxidative phosphorylation
ppar00650
Butanoate metabolism
ppar00720
Other carbon fixation pathways
ppar01100
Metabolic pathways
ppar01110
Biosynthesis of secondary metabolites
ppar01120
Microbial metabolism in diverse environments
ppar01200
Carbon metabolism
Module
ppar_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppar_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppar_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A8F97_03170
00650 Butanoate metabolism
A8F97_03170
09102 Energy metabolism
00190 Oxidative phosphorylation
A8F97_03170
00720 Other carbon fixation pathways
A8F97_03170
Enzymes [BR:
ppar01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
A8F97_03170
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
FAD_oxidored
Thi4
BEX
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AOR57909
UniProt:
A0A0H3IB76
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All DBs
Position
733471..735237
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AA seq
588 aa
AA seq
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MNLPVREFDAVVVGAGGAGMRAALQISQMGQSCALLSKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGSIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGC
TAICIETGEVVYFKAKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPLQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCEGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVSGQALTVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRSAGLHLK
ESLEEQGESRDASESDIEASLDRMNRWNNTRSGEDPVEIRKALQSCMQNNFSVFREGDAM
AKGLEELKVIRERLKDARLDDTSSEFNTQRIECLELDNLMETAYATAVSANFRTESRGAH
SRFDYPERDDENWLCHSLYLPQTDSMTRREVNMQPKLRPAFPPKIRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgccagtcagagaatttgatgcagtggttgtgggtgcgggtggcgcaggtatg
cgtgccgcgctacaaatctcccaaatgggccagtcctgtgccctattatcgaaagtgttc
ccaacccgttctcatactgtatctgcgcagggcggtattaccgtcgcgttgggtaatacc
catgaggataactgggaatggcatatgtatgacaccgtcaaagggtcggattacattggc
gatcaggacgcgattgaatatatgtgtaaaaccggcccggaagcgattctggaactggaa
cacatggggctaccgttctcccgtctggatgatggcagcatttatcagcgtccgttcggt
ggtcaatccaagaattttggcggtgagcaggctgcacgtaccgccgcagccgctgaccgt
accggccatgcgctgctgcacacgctgtatcagcagaacctgaaaaatcacaccactatt
ttctccgagtggtatgccctcgatctggtgaaaaatcaggatggcgcggttgtcggctgt
acggcgatctgtatcgaaaccggtgaagttgtctatttcaaagcgaaagcaaccgtgctg
gcaacgggcggtgcgggccgtatctaccagtccaccaccaatgcgcacattaataccggc
gacggcgtgggcatggcattgcgtgccggtgttccgttgcaggacatggaaatgtggcag
ttccacccaacgggtattgctggtgcgggtgtgctggtcaccgaaggctgtcgtggtgaa
ggcggctatttgctgaataagcacggtgagcgtttcatggaacgctatgcgccaaacgcg
aaagatctggccggccgtgatgtggttgctcgttctattatgatcgagattcgtgaaggt
cgtggctgtgagggtccatgggggccgcacgccaagctgaagctggatcatctgggtaaa
gacgttctggaatctcgtctgccgggtattttggaactgtcccgcacgtttgctcacgtc
gatccggtaaaagaaccgattccggttatcccaacctgtcactacatgatgggcggtatt
ccgaccaaagtgagcggtcaggcgttgacggtaaacgagaaaggcgaagatgtggtgatc
cctgggctgttcgccgtgggtgaaattgcctgcgtatcggttcatggtgccaaccgtctg
ggcggtaactcgttgctcgacctggtggtattcggtcgctctgccggacttcacctgaaa
gaatcactggaagaacagggcgaaagccgtgatgccagcgaatccgatattgaagcgtcg
ctcgatcgtatgaatcgttggaacaatacccgttccggtgaagatccggttgaaatccgc
aaggcgctgcaatcctgcatgcagaataacttctcggtattccgtgaaggcgatgcgatg
gcgaaagggttggaagagctgaaagtgatccgtgagcgcctgaaagacgcacgtctggat
gacacctcaagcgagttcaacacccagcgcattgagtgtctggaattggataacctgatg
gaaacggcttatgcaacagcggtttcggctaacttccgtaccgaaagtcgtggggcgcat
agtcgcttcgattacccagagcgtgacgatgaaaattggttgtgccattcattgtatctg
ccgcaaaccgacagcatgacgcgccgtgaggtgaacatgcagcctaaattgcgtccggcg
ttcccgccgaaaatacgtacttattaa
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