Pectobacterium parmentieri RNS 08-42-1A: A8F97_03190
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Entry
A8F97_03190 CDS
T04513
Name
(GenBank) succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar00020
Citrate cycle (TCA cycle)
ppar00640
Propanoate metabolism
ppar00660
C5-Branched dibasic acid metabolism
ppar00720
Other carbon fixation pathways
ppar01100
Metabolic pathways
ppar01110
Biosynthesis of secondary metabolites
ppar01120
Microbial metabolism in diverse environments
ppar01200
Carbon metabolism
Module
ppar_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppar_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A8F97_03190
00640 Propanoate metabolism
A8F97_03190
00660 C5-Branched dibasic acid metabolism
A8F97_03190
09102 Energy metabolism
00720 Other carbon fixation pathways
A8F97_03190
Enzymes [BR:
ppar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
A8F97_03190
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
AOR57913
UniProt:
A0A0H3I568
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All DBs
Position
740505..741671
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AA seq
388 aa
AA seq
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MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKAGGV
KVVSNKEDIRAFAENWLGKKLVTYQTDAQGQPVHQILVEAATDIDKELYLGAVVDRGTRR
VVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRELAFKLGLSGKQVAQFTKI
FMGLATLFLERDLALVEINPLVITKQGDLICLDGKLGADGNALFRQPELREMRDPSQEDS
REAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVGGGATKERVTE
AFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVAEVGVSVPVVVRLEGNNAELGAKK
LADSGLNIIAATSLTGAAQQVVAAVGDK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacacgagtatcaggcaaaacaactctttgctcgatatggtttaccggcaccc
accggctatgcctgtacgacaccgcgtgaagcagaagaagccgcatctaagattggctcg
ggtccgtgggttgtaaaatgtcaggttcacgcaggcggtcgcggtaaagcgggcggcgtt
aaagtagtcagtaacaaagaagacattcgcgcttttgctgaaaactggctgggtaaaaag
ctcgttacttatcaaactgacgcacagggtcaaccggttcatcagattctggttgaagcc
gcaacggatatcgacaaagagctttatctgggcgcggttgttgaccgtggcacgcgtcgt
gtcgtgttcatggcgtccaccgaaggtggcgtagaaattgaaaaagtggcggaagagacg
ccggaactgatccacaaagctgctatcgatccactggtaggtccacagccttatcagggc
cgcgagttggccttcaaactgggtttgagcggtaagcaagttgcgcaattcaccaaaatc
ttcatgggtctggcgacgctgttccttgagcgcgatctggcgctggtcgaaatcaaccca
ctggttatcaccaagcagggcgatctgatctgtctggatggcaagctgggcgcagacggt
aatgcactgttccgtcagcctgagctgcgtgaaatgcgtgacccaagccaggaagactct
cgtgaagcgcatgcagcccagtgggaactgaactatgttgcgctggacggcaacatcggc
tgtatggtgaacggtgccggtctggcgatgggcaccatggacatcgtgaagctacacggc
ggttctcctgctaacttccttgatgtaggcggtggcgcaacgaaagaacgtgttactgaa
gcgttcaaaattatcctgtctgacgacaaggtaaaagccgtctttgttaacatctttggt
ggcatcgtgcgttgcgatttgatcgctgacggtatcatcggcgcggtagccgaagtgggc
gttagcgtgccggttgtggtacgtcttgaaggaaacaatgcggaactgggtgccaagaaa
ctggcggatagcggcctgaatattattgccgcgaccagcctgacgggtgcagctcagcag
gttgttgcagcagtgggggataaataa
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