Pectobacterium parmentieri RNS 08-42-1A: A8F97_05330
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Entry
A8F97_05330 CDS
T04513
Name
(GenBank) transcriptional regulator
KO
K03604
LacI family transcriptional regulator, purine nucleotide synthesis repressor
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppar03000
]
A8F97_05330
Transcription factors [BR:
ppar03000
]
Prokaryotic type
Helix-turn-helix
LacI family
A8F97_05330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
HTH_Tnp_ISL3
MerR
HTH_31
PucR
HTH_10
TetR_N
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
AOR58322
UniProt:
A0A0H3I566
LinkDB
All DBs
Position
complement(1199680..1200705)
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AA seq
341 aa
AA seq
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MATIKDVAKRAGVSTTTVSHVINKTRFVAEETKAAVRAAIKELHYSPSAVARSLKVNHTK
SIGLLATSSEAPYFAEIIEAVENSCYAKGYTLVLCNSHNDIGKQRAYLSMLAQKRVDGLL
VMCAEYPPELLGMLEDYRSIPMVVMDWGQMHSDFTDTIIDNAFEGGYMAGRYLIERGHRD
IGAIPGIQERNTGNGRYLGFLKALKEADITVRDEWVVRGDFEPESGYKAMHQILAQKQRP
TAVFCGGDIMAMGAICAADELGLRVPQDISVIGYDNVRHARFFTPALTTIHQPKERLGQS
AFSMLLDRITSKREDAHVIEVHPTLIERRSVADGPFRDYRR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgattaaagatgtggcaaaacgtgctggcgtttccaccacaaccgtatcgcac
gtgatcaataaaacacgtttcgtcgccgaagagactaaggcagccgtcagggcagcaatc
aaggaattgcactattcgcccagcgccgtcgcccgcagcctcaaagttaatcacactaaa
tctatcggcttgctggccacatccagcgaagcaccctatttcgctgagatcattgaagca
gtcgaaaacagttgttatgccaaaggttacacgctggtgctgtgtaattctcataacgac
atcggtaaacagcgcgcttatctctcgatgctggcgcaaaaacgcgtcgacggcctgctg
gtcatgtgtgccgaatacccgccagaactcttgggcatgttggaagattatcgcagcatt
cccatggtcgtcatggactgggggcagatgcacagcgatttcaccgataccatcatcgat
aacgcctttgaaggcggctatatggcgggtcgctatctgattgaacgcggccatcgggat
atcggtgccatcccagggatacaagagcgcaacacggggaacgggcgctaccttggcttt
ttaaaagccctgaaggaagccgacatcaccgtgcgcgatgaatgggtcgtgcggggcgat
tttgaaccggaatccggttataaagccatgcatcagattctcgcgcaaaaacagcgaccc
accgccgtattctgtggtggcgacatcatggcgatgggtgccatttgtgcggcagacgaa
ttggggttacgtgtaccacaggacatttcggtgatcggttatgacaatgtgcgtcacgcg
cgtttctttacaccggcactgactaccatccatcagccgaaagagcgtctgggccaatcc
gccttctctatgttgctggatcggattaccagcaagcgcgaagatgcacacgtcattgaa
gtgcatccgacgctgattgaacgccgctcggttgccgacggcccgttccgcgattatcgc
cgctaa
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