Pectobacterium parmentieri RNS 08-42-1A: A8F97_05925
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Entry
A8F97_05925 CDS
T04513
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar00250
Alanine, aspartate and glutamate metabolism
ppar00310
Lysine degradation
ppar00350
Tyrosine metabolism
ppar00650
Butanoate metabolism
ppar00760
Nicotinate and nicotinamide metabolism
ppar01100
Metabolic pathways
ppar01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
A8F97_05925 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A8F97_05925 (gabD)
00310 Lysine degradation
A8F97_05925 (gabD)
00350 Tyrosine metabolism
A8F97_05925 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
A8F97_05925 (gabD)
Enzymes [BR:
ppar01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
A8F97_05925 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
A8F97_05925 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
A8F97_05925 (gabD)
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Motif
Pfam:
Aldedh
DUF742
Motif
Other DBs
NCBI-ProteinID:
AOR58441
UniProt:
A0A8B3F7Z2
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Position
1347203..1348675
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AA seq
490 aa
AA seq
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MQLKQSISLKQQTLFRQHCLIDGEWQDSQNDERLDVTNPATGEVLGCVPLVTVSQTEQAI
AAAERALVEWRKKTGKERAALLQAWARLIMDNQDDLAALLTAEQGKPLAEARGEIAYATS
FIDWFAEEAKRIEGNVLQSPQGQQRLMVIKQPIGVCAAITPWNFPAAMITRKVGPALAAG
CTMIVKPAEQTPFTALALAELAQQAGIPRGVLQVIVGDAQSVGKVLCDSPVVRKLSFTGS
TEVGRILMAQSAPTVKKLSLELGGNAPFIVFDDADVDQAVKGILASKFRNSGQTCVCANR
IYVQNGIYPTLVERLIEEVRKLNVGDGTQPGVTQGPLIDNDAVSKVEQHIADALSHGATL
LLGGQRHERGGTFFTPTIVGDVTREMRFAREETFGPVAPLFRFSDEAEVIAMANDTEFGL
AAYVYTRDAIRQWTVPEALDYGMVGINTGLISNEVAPFGGVKQSGLGREGSRFGIEDYLE
MKYLCVDLSR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgaaacagtctatttcactgaaacaacaaacattattccgtcaacactgcctg
attgacggcgagtggcaagacagccaaaacgatgaacgtctggatgttactaatcctgcg
acgggtgaggtgttgggttgtgtgccgctcgtgacggtgtcacaaactgagcaggcgatt
gctgctgcggaacgggcgttggttgagtggcgtaagaagacgggaaaagaacgtgccgcg
ctgttgcaggcatgggcgcgtctgattatggacaatcaggacgatctggctgcgttgctg
acggcggaacagggaaaaccattggcggaagcgcgcggcgaaattgcctatgccaccagt
tttatcgactggtttgcggaagaagccaaacgcattgaaggcaacgtattgcaatcgccg
caggggcaacagcgcttgatggtgattaagcagcccatcggcgtgtgtgccgcgataacg
ccgtggaatttcccggctgcgatgattacccgtaaagtcggccccgcactggcggcgggc
tgtacgatgatcgttaagcctgccgagcagacgccgtttaccgcgctggcgctggcggaa
ctggcgcagcaggcgggtattccgcgcggcgtgttgcaggtcattgttggcgatgcgcag
tcagttggtaaggtgctgtgtgatagtccggtggtacgcaagctgagcttcacgggttcc
acggaagtgggccggatcctgatggcgcagagcgcgccgacggtgaaaaaactctcgttg
gagttggggggtaacgcgccgtttatcgtgttcgatgatgctgatgtggatcaggcagtg
aaaggcattctggcctccaaattccgtaacagcggacagacctgcgtctgtgctaaccgg
atctatgtgcagaacgggatttatccgacgttggtagaacggctgatcgaggaagtgcgt
aagttaaacgtgggcgacggtacgcagcccggcgtgacgcaggggccgctgattgataac
gatgcggtcagcaaagtcgagcagcacattgccgatgcgttatcgcacggggcaacgcta
ttgctgggcggccaacgccacgaacgaggcggcacgtttttcacaccaacgattgtcggc
gacgtgacccgcgagatgcgttttgcacgtgaagagacgttcgggccagttgcaccgctg
ttccgcttcagtgatgaagccgaggtgattgcgatggcgaacgataccgaatttggtctg
gcagcctatgtctacacgcgcgacgccatacgccagtggacagtgccggaagcgctggac
tacggcatggttggcatcaatactggactgatttcgaatgaagtcgcaccgtttggcggg
gtgaagcagtctggactgggccgtgaaggctcacgtttcggtattgaagactatctggaa
atgaaatatctctgcgtcgatctttctcggtaa
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