Pectobacterium parmentieri RNS 08-42-1A: A8F97_06710
Help
Entry
A8F97_06710 CDS
T04513
Name
(GenBank) transcriptional regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppar03000
]
A8F97_06710
Transcription factors [BR:
ppar03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
A8F97_06710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
GntR
GTP_EFTU_D4
HTH_5
Phage_Mu_Gp48
Motif
Other DBs
NCBI-ProteinID:
AOR58595
UniProt:
A0A0H3I354
LinkDB
All DBs
Position
1518135..1518944
Genome browser
AA seq
269 aa
AA seq
DB search
MNNTDAATDKRVTGTSERREQIIQRLRQQGSVQVNDLSLFFGVSTVTIRNDLAFLEKQGI
AVRAYGGALVCDSGTAPVEPTVEDKSSLNTSLKRSIARVAANLIKPGHRVILDSGTTTYE
IARHMRNHKEVIAMTNGMNVANALLEAEGVELLTTGGHLRRQSLSFYGDQAEQSLQNYHF
DMLFLGVDAIDLERGISTHNEDEARLNRRMCEVAERIIVVTDSTKFNRSSLHKIIDTHKI
HMVIIDAGIPTESLNGLRKGGIEVVLVGE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaataataccgatgcagcaacggacaagcgtgtaacgggtacaagtgaaaggcgtgaa
cagattattcagcgtcttcgtcaacagggaagcgtacaggttaatgatctatcattattt
tttggtgtttctaccgtcactatccgtaacgacttagcttttctggaaaagcaaggtatt
gcggtacgtgcctatggcggcgcattagtttgcgattcgggcactgcgccggttgaaccc
accgttgaagacaaaagttctctaaatacgtctctgaaacgcagtattgctcgcgttgcg
gccaaccttatcaaaccaggccatcgtgtgattttagattccggcaccactacttatgaa
atagcgcgccacatgcgtaaccataaagaagtgattgccatgaccaacggcatgaatgtg
gcgaatgcgttactcgaagcagaaggtgtggaactgttgacgaccggggggcacttgcgc
cgtcagtcgctctcattctatggcgatcaggccgagcaatccctgcaaaattaccacttc
gatatgctattccttggggtggatgctatcgaccttgagcgtggcatcagtacccataac
gaagatgaagcgcgtcttaaccgccgaatgtgtgaagtggcagagcgcattattgtcgtg
acggactccactaagtttaaccgttccagtctgcataaaatcattgatacccataaaatt
catatggttatcattgatgcggggatcccaactgaaagcttgaatgggctacgtaaaggc
gggattgaagtggtactggttggtgaatag
DBGET
integrated database retrieval system
