Pectobacterium parmentieri RNS 08-42-1A: A8F97_07470
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Entry
A8F97_07470 CDS
T04513
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar00061
Fatty acid biosynthesis
ppar00071
Fatty acid degradation
ppar01100
Metabolic pathways
ppar01212
Fatty acid metabolism
ppar02024
Quorum sensing
ppar04146
Peroxisome
Module
ppar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
A8F97_07470
00071 Fatty acid degradation
A8F97_07470
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
A8F97_07470
09145 Cellular community - prokaryotes
02024 Quorum sensing
A8F97_07470
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppar01004
]
A8F97_07470
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppar04147
]
A8F97_07470
Enzymes [BR:
ppar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
A8F97_07470
Lipid biosynthesis proteins [BR:
ppar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
A8F97_07470
Exosome [BR:
ppar04147
]
Exosomal proteins
Exosomal proteins of breast milk
A8F97_07470
Exosomal proteins of breast cancer cells
A8F97_07470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_3
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AOR58745
UniProt:
A0A8B3GAG9
LinkDB
All DBs
Position
complement(1684557..1686242)
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AA seq
561 aa
AA seq
DB search
MEKIWLSRYPADVPAEIDPDRYSSLIDMFENNVRRYADRPAFINMGEVMTFRKLEERSRA
FAAYLQNQLKLQKGDRVALMMPNLLQYPVALFGVLRAGMVVVNVNPLYTPRELEHQLKDS
GASTIVIVSNFAHTLEKVVHNTAVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHL
PDAISFRRVLQEGRRQQYVRPDIINSDLAFLQYTGGTTGVAKGAMLTHRNMQANVAQCLA
AYGPVLREGNEWVVTALPLYHIFALTANCLLFFELGGQNLLITNPRDIPAVVKELKQYPF
TAITGVNTLFNALLNNKEFHELDFSTLRLSVGGGASVQRAVAERWEKLTGKHLLEGYGLT
ESSPLVAVNPYDLKHYSGSIGLPVASTDVRIIDDNGNDVGPGESGELWVHGPQIMLGYWQ
QPAATDEVLKDGWLATGDIVTSDDEGFLRVIDRKKDMILVSGFNVYPTEIEDVISRHPKV
SESAVVGVESEVSGEAVKAFVVRRDNSLTKEELVTHCRRNLTGYKVPKEIEFCEDLPKSN
VGKILRRELREDKKAKKDAAA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaatttggttatcacgttatccggcagacgttccggcggaaattgatcccgat
cgctattcgtcgttgattgacatgtttgaaaataacgtaaggcgttacgccgatcgacct
gcattcatcaacatgggtgaagtgatgacgtttcgcaagttggaagagcggagccgggcg
tttgcggcctatctgcaaaaccagcttaaattgcagaaaggcgatcgcgtagcgttgatg
atgcccaacctgttgcaataccctgttgcgctgtttggtgtgctgcgtgcgggtatggtg
gtcgtcaacgttaacccgctgtacacgccgcgtgaactggaacaccagctaaaagacagc
ggtgccagcacgattgttattgtgtctaacttcgcgcatacgctggaaaaagttgttcat
aatacggcagtgaagcacgttatcctgacccgtatgggcgaccagctatccacggcaaaa
ggcacgttggttaactttgtagtgaaatacattaagcgactggtgcccaaatatcattta
ccggatgccatctcgtttcgtcgtgtgttgcaagaagggcggcgtcagcagtatgttcgg
cctgacatcatcaatagcgatcttgcctttctgcaatatactggcggtacgacgggcgtt
gccaaaggcgcgatgctcacgcaccgcaatatgcaggcgaatgtggcacagtgtcttgcg
gcttatggcccggtgttgagggaagggaatgaatgggtggtcacggcgttaccgctgtac
cacatttttgctttgacggctaactgtctgcttttctttgaactgggcggacagaatctg
ttgatcaccaatccccgagatattcccgcggtagtaaaagaactgaagcaatatcctttc
actgcgattacgggcgtcaatacgctgtttaatgcgttgctcaataataaagagttccat
gagcttgatttctcgacactgcggttatccgttggcggaggtgcgtcagtgcaacgggct
gtggcggaacgctgggagaaactcacgggcaaacatctgcttgaaggatatggcttaacc
gaaagttcccctctggtggctgtgaacccctacgatctcaagcactatagcggcagtatc
ggactgccagtagcatcaacagatgtcagaattatcgacgataacggcaacgatgtgggg
ccgggcgagtccggtgaattgtgggtgcatgggccacagataatgttagggtactggcag
cagcctgccgcgacggatgaggtactgaaagacggttggttggcaacgggtgacattgtc
acttctgatgatgaaggattcctgcgggtaatcgatcgtaagaaagacatgattctggtt
tccggctttaacgtctacccgacggaaattgaagatgtgatcagccgtcaccccaaagtg
tccgaatcggcggtggttggggtagaaagtgaggtctccggtgaggcagtaaaagccttt
gtggtaaggcgtgataactcgttaacgaaagaggagctcgttacccactgtcgccgtaat
cttacgggctataaagtgccgaaagagatcgaattttgtgaggatttaccgaaatccaac
gtcgggaaaattctgcgccgcgaattacgtgaagataagaaggcgaagaaagacgctgcc
gcctga
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