Pectobacterium parmentieri RNS 08-42-1A: A8F97_07730
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Entry
A8F97_07730 CDS
T04513
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar00040
Pentose and glucuronate interconversions
ppar01100
Metabolic pathways
ppar01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A8F97_07730
Enzymes [BR:
ppar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
A8F97_07730
SSDB
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Tricorn_N
Motif
Other DBs
NCBI-ProteinID:
AOR58797
UniProt:
A0A0H3I8E7
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All DBs
Position
complement(1738945..1740111)
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AA seq
388 aa
AA seq
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MAKGNKIPLTFHTYQDSATGTEVVRLTPPDVICHRNYFYQKCFFNDGSKLLFGAAFDGPW
NYYLLDLKAQNATQLTEGKGDNTFGGFLSPNDDALYYVKNTRNLMRVDLATLEEKTIYQV
PDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFYFTNPCCRLIRVDLVTGEA
ETILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGTNMRKVKEHAEGESC
THEFWVPDGSAMIYVSYLKDDTNRYIRSIDPVTLEDRQLRIMPPCSHLMSNYDGTLLVGD
GSDAPVDVQDDGGYKIENDPFLYVFNLKTGKEHRIAQHNTSWEVLEGDRQVTHPHPSFTP
DNKQVLFTSDVDGKPALYLAKVPDSVWN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtaacaagattcccctaacgtttcatacctatcaggattcagcaactggc
accgaagttgtgcgtttaaccccgcccgatgttatctgccaccgcaactatttctaccag
aaatgtttcttcaatgacggcagcaaactgctgtttggtgcggcatttgatggtccatgg
aattactatctactggatttaaaagcgcagaatgccacgcagttgacggaaggcaaaggc
gacaatactttcggtggtttcctgtccccgaatgacgatgcgctgtattacgttaaaaat
acccgtaatctgatgcgtgtcgatctggctacgttggaagagaaaaccatttatcaggtg
cctgacgattgggtcggttacggtacgtgggttgccaattccgattgcactaagatggtc
ggtattgagatcaaaaaagaagactggaaaccactgactgattggaaaaaattccaggag
ttctatttcactaatccttgctgccgcctgattcgcgtcgatttggtaacaggcgaagcg
gagacgatccttcaggagaatcagtggctgggtcacccaatctaccgtccgggtgatgac
aacacggtcgctttctgccacgaaggcccgcacgatctggttgatgcccgtatgtggttc
atcaacgaagacggtaccaacatgcgtaaagtgaaagagcatgctgaaggcgaaagctgt
acccacgaattctgggtaccagatggttccgcgatgatttacgtctcttaccttaaagac
gatactaaccgctacatccgcagtatcgatcccgtgacgctggaagatcgtcaattgcgc
atcatgccaccgtgttctcacctgatgagtaactatgatggcacgctgttggttggtgac
ggttccgatgcaccagtcgacgtgcaggatgatggtggctacaagattgagaacgatccg
ttcctgtatgttttcaacctgaaaactggcaaagaacaccgtattgcacagcacaataca
tcctgggaagtgttggaaggcgaccgtcaggttactcacccacacccttctttcacgccg
gataataaacaagtcctgtttacttctgacgtagatggaaagcctgcgctgtatctggcg
aaggttcctgattcagtctggaactaa
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