Pectobacterium parmentieri RNS 08-42-1A: A8F97_08395
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Entry
A8F97_08395 CDS
T04513
Name
(GenBank) tRNA (uridine-5-oxyacetic acid methyl ester)(34) synthase TrmP
KO
K15256
tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppar03016
]
A8F97_08395
Transfer RNA biogenesis [BR:
ppar03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
A8F97_08395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_25
Methyltransf_12
Methyltransf_11
Methyltransf_31
Methyltransf_2
CheR
Rsm22
Methyltransf_23
MTS
PrmA
CBF_beta
Motif
Other DBs
NCBI-ProteinID:
AOR58926
UniProt:
A0A8B3FCJ0
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All DBs
Position
1871845..1872588
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AA seq
247 aa
AA seq
DB search
MPNRDMLFSVPIANLGDWTFDERVADVFPDMIQRSVPGYSNIISMIGMLAERFARSDSHV
YDLGCSLGAATLSMRRNIHVPGCKIIAVDNSPAMVKRCRSHIDAFRSDTPVEIIEADILN
IDITNASMVVLNFTLQFLEPSQRQVLIERIYQGLNPGGVLVLSEKFNFADKDVGELLFNM
HLDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLADAGFEHSEIWFQCFNFGSLLA
VKAEEKA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaccgcgatatgcttttttctgtgccaattgccaatttaggcgactggacattc
gacgaacgcgttgccgacgtatttcccgatatgatccaacgttccgtgcccggctattcc
aacatcatctcaatgattggcatgctggcagagcgattcgcccgctcggatagccacgtc
tacgatctgggatgttcgctgggcgcggccaccctgtctatgcgacgtaatatccatgtg
ccgggctgcaaaattatcgcggtggacaactctccggcgatggtgaaacgctgccgtagc
cacattgacgctttccgttccgatacgcccgtcgagattatagaagcggatattctgaac
attgatatcacgaatgcttccatggttgtgctgaattttacccttcagtttctggaacct
tcccagcgtcaggtacttatcgagcgtatttaccagggattaaatcccggtggcgtgcta
gtgctctccgagaaattcaattttgcagacaaagacgtcggcgaattgctgttcaatatg
catctcgatttcaaacgggcaaatggctacagcgagctggaaatcagtcagaaacgcagc
atgctggaaaatgtcatgttgaccgactcagtagaaacccataaggctcgactggcagat
gctggttttgagcacagcgagatctggtttcagtgttttaattttggttcgttattagcc
gtaaaagcagaggaaaaggcgtga
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