Pectobacterium parmentieri RNS 08-42-1A: A8F97_08850
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Entry
A8F97_08850 CDS
T04513
Name
(GenBank) ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppar03009
]
A8F97_08850
Ribosome biogenesis [BR:
ppar03009
]
Prokaryotic type
ribosomal protein modification factors
A8F97_08850
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Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AOR59016
UniProt:
A0A0H3I2Y9
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All DBs
Position
1981453..1983216
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AA seq
587 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQQLQDLGFNIEEASWLNPVPNVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFYLGKTIANGDFVHYPNEKWFPIPEDDALPEG
ILDARLHQFYDPEQELSASDLIDLQSGNADRGICALPFTRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTANEARVQGLSEVFERSIKNRIIAESISLPEIPQEVLNRYPGVVEAIATLEKE
GFPIFSYDASLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDMFKKQADYEFADWSFKGSTEEEFATLM
AIFKQEDKEVYIADYEHLAVYACRIIVPGMSDIYPADDLLLANNSMGAHLRDTLLTLPNN
KWEQEDYLALLQQLDDEGLDDFTRVRELLGIATGKDNGWLTLRVGELKAMLALAGGDLEQ
ALTWTEWTQDFNDSVFSAQRSNYYRCLQTLLLLALEPERDPAEYYDAFTKMYGSETVDAA
SAAVAGEACFYGLFAIDDTFTSLPAHQSLLAAYEKLQQAKRRYWQSK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaacgtttatcccaggcaaagacgccgccctggaagattccatcgcccgtttt
caacagcaactccaggacctggggtttaacatcgaagaagcgtcatggctgaacccggtg
ccaaacgtctggtctgtccatatccgagaccgagattgcccactttgcttcacgaacggt
aaaggtgccagtaagaaagcagcactggcctcggcgttaggcgagtatttcgagcgtctg
tccactaactatttctttgctgacttctacctcggcaaaactatcgctaacggcgatttc
gtccactatccgaatgaaaaatggttccctattccggaagacgatgcactgccggaaggc
attctggatgcccgtctgcaccagttttacgatcctgagcaggaactgagcgccagcgat
ctgatcgatctgcaatccggcaatgccgacagaggcatttgcgcgctgccgtttacccgc
cagtccgatcagcaaaccgtctatattccgatgaatatcatcggtaatctgtacgtctct
aacgggatgtccgctgggaataccgccaacgaagcccgcgttcaggggctgtcagaagta
tttgagcgtagcatcaaaaaccgtatcattgctgaatccatcagcctgccagaaatcccg
caggaggtgctgaaccgctacccgggcgtggtcgaagccattgcaacactggaaaaagaa
ggtttcccaatcttctcttacgatgcctcactgggcgggaaatatccggtcatctgcgtg
gtgctgtttaaccccgctaacggcacctgctttgcttccttcggcgcgcatcctgacttt
ggcgtagcgctggagcgtaccgtcaccgaactgttgcagggacgcggcctgaaagatctg
gacgtgttcaccccaccgacgtttgatgatgaggaagtggctgagcacgctaatctggaa
acccactttatcgattctagcggtctgatctcttgggatatgttcaagaagcaggctgat
tatgaatttgccgactggagctttaaagggtcgacagaagaagaatttgcaacgctgatg
gcgatcttcaagcaggaagataaagaagtttatattgccgattatgagcatctggccgtt
tatgcctgtcgcatcatcgttccaggcatgtcagacatctaccctgccgacgatctgctg
ttggccaataacagcatgggtgctcacctgcgcgacacgctgctgacgctaccaaacaac
aaatgggaacaagaagactacctggcgctgttgcaacagttggatgacgaaggattggat
gacttcacccgcgtgcgcgagctgcttggtattgccactggcaaagataatggctggctt
actctacgcgttggagaattaaaagctatgttggcgctggccggcggcgacctggagcag
gcgctgacctggacagaatggacacaggatttcaacgattcggtcttcagcgcacagcgc
agcaattactaccgttgcctgcaaaccctgctgctgctggcactcgagcctgagcgcgat
cccgctgaatactacgatgccttcactaaaatgtacggcagtgagacagtcgatgccgcc
agtgccgccgttgctggagaagcgtgcttctacggcctgtttgccatagacgataccttt
acctctttacctgcgcatcagtcgttgctggctgcttatgaaaagctgcagcaggccaaa
cgtcgttattggcagtcaaaataa
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