Pectobacterium parmentieri RNS 08-42-1A: A8F97_09285
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Entry
A8F97_09285 CDS
T04513
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppar03009
]
A8F97_09285
Enzymes [BR:
ppar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
A8F97_09285
Ribosome biogenesis [BR:
ppar03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
A8F97_09285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
JAKMIP_CC3
DUF4082
Motif
Other DBs
NCBI-ProteinID:
AOR59103
UniProt:
A0A0H3I1M0
LinkDB
All DBs
Position
complement(2086000..2086695)
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AA seq
231 aa
AA seq
DB search
MRLDKFLSQQLEISRSLVARELHAQRVTVDGEVVKSGAFKLSPEHNVEFDGNPLKQQSGP
RYFMLNKPQGYVCSTDDPDHPTILYFMDVPVAYKLHAAGRLDIDTTGLVLLTDDGQWSHR
ITSPKHECEKTYLVTLEQPLAEDTAAQFTAGVQLHSEKNLTKPASLEKVTDYVVRLTISE
GRYHQVKRMFAAVGNRVVELHRERIGGISLDSELEPGEYRELSAEEVASVK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcgattggacaaatttttatcccaacagttggaaattagccgttcactggtggcgcgt
gagctccacgcacagcgcgttaccgtcgatggtgaagtggtaaaaagcggcgcattcaag
ttatccccagagcataacgttgaatttgatggcaacccactgaaacagcagagcggccca
cgttatttcatgttgaataagcctcagggctacgtttgttcaacggacgatcccgatcat
cctaccattctgtattttatggatgtgccagtagcgtacaaactgcatgcggcagggcgg
ctggacatcgataccacggggttggtgctgttaactgacgatggtcaatggtcgcatcgt
attacctcacctaaacatgagtgtgaaaaaacgtatttggtgacgctggaacagccgctg
gccgaggataccgctgcgcaatttacggcaggcgtacagttgcatagcgagaagaatctc
actaagcctgcctcgcttgagaaggtaacggattatgtcgtgcggttgacgattagcgaa
ggtcgctatcatcaggtgaaaaggatgtttgctgcggtggggaatcgcgtcgttgagctg
catcgcgagcgtattggcggcatttctctggatagcgaactggaaccgggagaataccgc
gagttgagtgctgaagaggtagccagcgtaaaataa
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