KEGG   Pectobacterium parmentieri RNS 08-42-1A: A8F97_09295
Entry
A8F97_09295       CDS       T04513                                 
Name
(GenBank) ATP-dependent helicase
  KO
K19789  DNA repair protein RadD
Organism
ppar  Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:ppar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppar03400]
    A8F97_09295
DNA repair and recombination proteins [BR:ppar03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     A8F97_09295
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SWI2_SNF2 DUF7577 AAA_30 Zn_Ribbon_1 AAA_22 AAA_16 SLFN-g3_helicase zf-tcix DZR AAA Zn_ribbon_3
Other DBs
NCBI-ProteinID: AOR59105
UniProt: A0A8B3FBR1
LinkDB
Position
2087151..2088911
AA seq 586 aa
MSFTLRPYQREAVSATLDYFRRHTQPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYCAWDLEADIFAAGLQQRESQGKVVFGSVQSVARNLDQFDNAFSLLIIDECH
RISDDDNSQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGMIRGDEQCLFRD
CIYELPLRYMIKHGFLVPPDRLDMPVVQYDFSRLVARSSGLFSEADLNLELKRQQRITPH
IISQVIDYAQTRRGVMIFASTVEHAKEIAMLLPAGQAALVSADTPPAERDALIDAFKQQS
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLYPGKTDCLILDYAGNP
HDLYTPEVGNSKPHAGSQPVQVFCPECSFANLFWGKTTPDGDIIEHYGRRCQGWEMAENG
QRQQCDFRFRFKVCPHCGAENDIAARRCHQCNEVLVDPDDMLKAALKLKDALVLRCSGMS
FEQGQDAKGEWLKITYHDEEGAEVSERFRLHSTAQRHVFLQQFLRVHQRAPGTPFNWQNA
ADVIAQQILLRPPDFVVARKNGKFWQIREKIFDYQGRFRRANELRG
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgtcattcacactacggccttaccagcgtgaagcggtttccgccacgctcgactatttt
cgccgtcatacccaaccagccgtcatcgttttgcctactggcgcagggaagagtctggtc
atcgccgaattagcacggcttgcacgcggccgtgttttggtgctcgctcacgtcaaagaa
ctggtggcgcaaaatcacgccaaatactgtgcctgggatttggaagcggatatcttcgct
gcggggctgcaacagcgagagagccagggaaaagtggtctttggcagcgtgcagtccgtt
gctcgtaacctcgaccagttcgataatgcgttctcactgttgatcattgatgaatgccac
cgcatcagcgacgacgataacagccaatatcaacaaatcatccagcatctgcaaaaaacc
aatccgcagttacggctactcggcttaaccgcaacgccctatcggcttggcaaaggctgg
atatatcagtatcactatcacggcatgatacgtggtgacgaacagtgtttgttccgcgac
tgcatctatgagctgccgctacgctatatgatcaagcatggctttctggtgccgcctgac
cggttggatatgccagtggtgcaatatgattttagccggctcgtcgcccgtagcagcggg
ctattcagcgaagctgacctgaatctcgaactcaaacgccagcagcgcattacgccgcat
atcatcagtcaggtcatcgattatgcgcaaacacggcgcggcgtgatgatttttgcctcc
accgtcgagcatgccaaagagattgcgatgctgttaccggcgggtcaggctgcgctggtc
agcgccgacacgccacctgccgagcgtgatgcgttgattgacgcttttaagcaacagtct
cttcgctatctggtcaacgtggcggtactgacaaccggctttgacgctccgcatgtcgac
cttattgccattctccgcccgactgagtctgtgagtctgtatcagcaaattgtcgggcgc
ggtctgcgtttgtacccgggaaaaacggactgcctgatactggattacgcaggcaaccca
cacgatctctatacgccagaagtcggcaacagcaagccgcatgctggcagccagccagtg
caggtcttctgccctgaatgtagttttgccaatctgttctggggaaaaaccactcccgat
ggcgatatcatcgaacactatggccggcgctgtcagggctgggaaatggcggaaaatggg
caacgccaacagtgtgattttcggtttcggtttaaagtctgtccgcactgcggcgcggaa
aacgatattgccgcacggcgctgccaccagtgtaatgaagtattggttgaccccgatgac
atgctaaaagcggcgctaaagttgaaagatgcgttggttttacgctgtagcggcatgagc
ttcgagcagggacaggatgcaaaaggagaatggctgaaaatcacctatcatgatgaagaa
ggtgccgaagtgagtgaacgttttcgcctacactccaccgcgcagcgccacgtttttctg
caacagtttttacgtgttcaccaacgcgcaccgggaacgccgtttaactggcagaatgcc
gccgatgtcatcgcacagcagatattattgcgccctcccgactttgtcgtcgcccgtaaa
aacgggaaattctggcaaatacgcgaaaagatctttgattatcagggccgctttcgccgc
gccaacgaactccgcggctaa

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