Pectobacterium parmentieri RNS 08-42-1A: A8F97_09295
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Entry
A8F97_09295 CDS
T04513
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppar03400
]
A8F97_09295
DNA repair and recombination proteins [BR:
ppar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
A8F97_09295
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DUF7577
AAA_30
Zn_Ribbon_1
AAA_22
AAA_16
SLFN-g3_helicase
zf-tcix
DZR
AAA
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AOR59105
UniProt:
A0A8B3FBR1
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All DBs
Position
2087151..2088911
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AA seq
586 aa
AA seq
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MSFTLRPYQREAVSATLDYFRRHTQPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYCAWDLEADIFAAGLQQRESQGKVVFGSVQSVARNLDQFDNAFSLLIIDECH
RISDDDNSQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGMIRGDEQCLFRD
CIYELPLRYMIKHGFLVPPDRLDMPVVQYDFSRLVARSSGLFSEADLNLELKRQQRITPH
IISQVIDYAQTRRGVMIFASTVEHAKEIAMLLPAGQAALVSADTPPAERDALIDAFKQQS
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLYPGKTDCLILDYAGNP
HDLYTPEVGNSKPHAGSQPVQVFCPECSFANLFWGKTTPDGDIIEHYGRRCQGWEMAENG
QRQQCDFRFRFKVCPHCGAENDIAARRCHQCNEVLVDPDDMLKAALKLKDALVLRCSGMS
FEQGQDAKGEWLKITYHDEEGAEVSERFRLHSTAQRHVFLQQFLRVHQRAPGTPFNWQNA
ADVIAQQILLRPPDFVVARKNGKFWQIREKIFDYQGRFRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcacactacggccttaccagcgtgaagcggtttccgccacgctcgactatttt
cgccgtcatacccaaccagccgtcatcgttttgcctactggcgcagggaagagtctggtc
atcgccgaattagcacggcttgcacgcggccgtgttttggtgctcgctcacgtcaaagaa
ctggtggcgcaaaatcacgccaaatactgtgcctgggatttggaagcggatatcttcgct
gcggggctgcaacagcgagagagccagggaaaagtggtctttggcagcgtgcagtccgtt
gctcgtaacctcgaccagttcgataatgcgttctcactgttgatcattgatgaatgccac
cgcatcagcgacgacgataacagccaatatcaacaaatcatccagcatctgcaaaaaacc
aatccgcagttacggctactcggcttaaccgcaacgccctatcggcttggcaaaggctgg
atatatcagtatcactatcacggcatgatacgtggtgacgaacagtgtttgttccgcgac
tgcatctatgagctgccgctacgctatatgatcaagcatggctttctggtgccgcctgac
cggttggatatgccagtggtgcaatatgattttagccggctcgtcgcccgtagcagcggg
ctattcagcgaagctgacctgaatctcgaactcaaacgccagcagcgcattacgccgcat
atcatcagtcaggtcatcgattatgcgcaaacacggcgcggcgtgatgatttttgcctcc
accgtcgagcatgccaaagagattgcgatgctgttaccggcgggtcaggctgcgctggtc
agcgccgacacgccacctgccgagcgtgatgcgttgattgacgcttttaagcaacagtct
cttcgctatctggtcaacgtggcggtactgacaaccggctttgacgctccgcatgtcgac
cttattgccattctccgcccgactgagtctgtgagtctgtatcagcaaattgtcgggcgc
ggtctgcgtttgtacccgggaaaaacggactgcctgatactggattacgcaggcaaccca
cacgatctctatacgccagaagtcggcaacagcaagccgcatgctggcagccagccagtg
caggtcttctgccctgaatgtagttttgccaatctgttctggggaaaaaccactcccgat
ggcgatatcatcgaacactatggccggcgctgtcagggctgggaaatggcggaaaatggg
caacgccaacagtgtgattttcggtttcggtttaaagtctgtccgcactgcggcgcggaa
aacgatattgccgcacggcgctgccaccagtgtaatgaagtattggttgaccccgatgac
atgctaaaagcggcgctaaagttgaaagatgcgttggttttacgctgtagcggcatgagc
ttcgagcagggacaggatgcaaaaggagaatggctgaaaatcacctatcatgatgaagaa
ggtgccgaagtgagtgaacgttttcgcctacactccaccgcgcagcgccacgtttttctg
caacagtttttacgtgttcaccaacgcgcaccgggaacgccgtttaactggcagaatgcc
gccgatgtcatcgcacagcagatattattgcgccctcccgactttgtcgtcgcccgtaaa
aacgggaaattctggcaaatacgcgaaaagatctttgattatcagggccgctttcgccgc
gccaacgaactccgcggctaa
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