Pectobacterium parmentieri RNS 08-42-1A: A8F97_09880
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Entry
A8F97_09880 CDS
T04513
Name
(GenBank) cell density-dependent motility repressor
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppar03000
]
A8F97_09880
Transcription factors [BR:
ppar03000
]
Prokaryotic type
Helix-turn-helix
LysR family
A8F97_09880
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
TPR_DOCK
Ribosom_S30AE_C
DUF2711
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AOR59220
UniProt:
A0A0H3I361
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All DBs
Position
complement(2222593..2223492)
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AA seq
299 aa
AA seq
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MLNNIETKWLYDFIMLEEHRSFTLAAEKRNISQSSFSRRIQALEAAVGFDIFDRSALPLQ
LTEQGRVFHAYIRNTLDDLEYQLNKLHGGDNYKNKITIAAAHSLSVFIMPELLKDVPDPQ
EKIFYVESIDVDEAVLNLKEGRSDFIFSFYNEDLMGEPFMHEKILESRLYPVCACDSAGK
PLFDVSASSVPLLNYTETSYMGRQVSRYLSSVDGDKFTVNFVSSMSDLLKRMTKKGYGIA
WLPDYSIQEELKNKELAILSMENAVIRMGVYLYRLDARLNMASEKFWRYMKGLSSTSGL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgctaaacaatatcgaaaccaagtggctctatgattttatcatgttggaagaacaccgg
agttttacgctggctgccgagaagcggaatatctctcaatcctcattcagtcggcgcatt
caggcgctggaagcggccgtcgggtttgatatttttgaccgcagcgcgctgccgttgcaa
ttaaccgaacagggccgcgtgttccacgcctatatccgcaatacgctggacgatttagag
tatcagctcaataagttgcacggtggggataattataaaaataagatcaccattgcggca
gcgcattcgctgtcggtgtttatcatgccggagttgttaaaagacgtgccagacccgcaa
gaaaaaatcttctatgttgaatcgatcgatgtagatgaagccgtgctgaatcttaaagaa
gggcgcagcgacttcattttctcgttttacaatgaggatctaatgggggagccttttatg
cacgagaagatactggaatcccggctttatcctgtctgcgcgtgcgacagtgcagggaag
ccgctgtttgacgtgagtgcttcatcagtgccactgctcaactataccgagacaagctac
atggggcgtcaggtcagtcgttacttatccagtgttgacggcgataagttcacggtcaat
tttgtttcttccatgagcgacttgctcaagcgcatgaccaagaaaggttatggtattgcc
tggttgccggactattcgattcaggaagagttgaaaaataaagagttggcgatactgagt
atggaaaatgcggtgatccgcatgggcgtttatctgtatcggcttgatgcgcgtctgaat
atggcgtccgagaagttttggcgctacatgaaagggctgtcatcgacgtctgggctataa
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