KEGG   Pectobacterium parmentieri RNS 08-42-1A: A8F97_10005
Entry
A8F97_10005       CDS       T04513                                 
Name
(GenBank) DNA-binding protein
  KO
K03746  DNA-binding protein H-NS
Organism
ppar  Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:ppar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ppar03036]
    A8F97_10005
   03400 DNA repair and recombination proteins [BR:ppar03400]
    A8F97_10005
Chromosome and associated proteins [BR:ppar03036]
 Prokaryotic type
  Nucleoid associated proteins
   HNS (histone-like nucleoid structuring protein)
    A8F97_10005
DNA repair and recombination proteins [BR:ppar03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A8F97_10005
SSDB
Motif
Pfam: Histone_HNS_N Histone_HNS NBP1 DUF3037 DUF848 DUF6626 PQQ_syn_pqqF_N_2 CR6_interact Allexi_40kDa
Other DBs
NCBI-ProteinID: AOR59244
UniProt: A0A8B3F7L1
LinkDB
Position
2252502..2252903
AA seq 133 aa
MSEALKVLNNIRTLRAQARETDLATLEEMLEKLTIIVEERREEEAKTQQEQSERLAKIEA
LRAKLLEDGIDPAELLGSFSVTKSAKSKRAPRPAKYKYTDENGNEKLWTGQGRTPKAIAA
ALGNGKTLEDFEI
NT seq 402 nt   +upstreamnt  +downstreamnt
atgagtgaagctctcaaagtattaaataacattcgtaccctgcgtgctcaggcacgagaa
accgatctggcgacattggaagaaatgctggaaaaactcaccattattgttgaagagcgc
cgcgaagaagaagctaaaacccaacaagaacagtcagagcgtctggcaaaaattgaagcc
cttcgtgccaaactgttagaagatggtatcgatccggctgaactacttggctctttttct
gtcaccaagtcggcaaaatctaaacgcgctcctcgtccagctaaatacaaatataccgat
gaaaacggcaatgaaaagttatggacaggtcagggtcgtactcctaaagccattgctgct
gcgctagggaatggtaagactctggaagattttgagatctga

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