Pectobacterium parmentieri RNS 08-42-1A: A8F97_10005
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Entry
A8F97_10005 CDS
T04513
Name
(GenBank) DNA-binding protein
KO
K03746
DNA-binding protein H-NS
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppar03036
]
A8F97_10005
03400 DNA repair and recombination proteins [BR:
ppar03400
]
A8F97_10005
Chromosome and associated proteins [BR:
ppar03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
A8F97_10005
DNA repair and recombination proteins [BR:
ppar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A8F97_10005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
NBP1
DUF3037
DUF848
DUF6626
PQQ_syn_pqqF_N_2
CR6_interact
Allexi_40kDa
Motif
Other DBs
NCBI-ProteinID:
AOR59244
UniProt:
A0A8B3F7L1
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All DBs
Position
2252502..2252903
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AA seq
133 aa
AA seq
DB search
MSEALKVLNNIRTLRAQARETDLATLEEMLEKLTIIVEERREEEAKTQQEQSERLAKIEA
LRAKLLEDGIDPAELLGSFSVTKSAKSKRAPRPAKYKYTDENGNEKLWTGQGRTPKAIAA
ALGNGKTLEDFEI
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagctctcaaagtattaaataacattcgtaccctgcgtgctcaggcacgagaa
accgatctggcgacattggaagaaatgctggaaaaactcaccattattgttgaagagcgc
cgcgaagaagaagctaaaacccaacaagaacagtcagagcgtctggcaaaaattgaagcc
cttcgtgccaaactgttagaagatggtatcgatccggctgaactacttggctctttttct
gtcaccaagtcggcaaaatctaaacgcgctcctcgtccagctaaatacaaatataccgat
gaaaacggcaatgaaaagttatggacaggtcagggtcgtactcctaaagccattgctgct
gcgctagggaatggtaagactctggaagattttgagatctga
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