KEGG   Pectobacterium parmentieri RNS 08-42-1A: A8F97_10720
Entry
A8F97_10720       CDS       T04513                                 
Name
(GenBank) type IV secretion system protein VirB5
  KO
K03200  type IV secretion system protein VirB5
Organism
ppar  Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    A8F97_10720
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppar02044]
    A8F97_10720
Secretion system [BR:ppar02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   A8F97_10720
SSDB
Motif
Pfam: T4SS ABC_tran_CTD DUF4559 PI_PP_C ddrB-ParB VMAP-M14 FUSC BLOC1_2 Retrotrans_gag
Other DBs
NCBI-ProteinID: AOR59375
UniProt: A0A8B3FB03
LinkDB
Position
2368040..2368756
AA seq 238 aa
MQTRNVFLALSLLVSTPVLSAGIPVFDAASNTESINQWIQKLQQWQETVTHYKSELDAYK
QQLATATGIRDIQGFLHDAKNLKNDIEHLRKNGISLDDLLTNPSGYYSSDLQRLYNKYQS
FDICNQSSSSQRYLESCKQLVLNQAVSIENTSYVQNKINSTLNDISDLSDRIANAKDSKE
SQDLANAVAAKSVQLNALTSQWEMSVKQAEQRAAMLTQQRQKAFNEQQLVSPIPDFNH
NT seq 717 nt   +upstreamnt  +downstreamnt
atgcagaccagaaacgtctttctggcgttatcgctattggtttccacacccgtactcagc
gccggtattccggtgtttgatgccgccagtaataccgagtcaattaaccaatggatacag
aaactccagcaatggcaggaaacggttacccattataaaagcgagcttgacgcctataag
cagcaattagcgaccgcaacaggcatacgggatattcagggatttctccacgatgctaaa
aacctaaaaaacgatatcgaacatctccgtaaaaatggtatttcactggatgacctgctg
accaacccaagcggttattattcttctgaccttcagcgcctatataacaaatatcaatcg
tttgatatttgtaatcagtccagttcatcgcaacgttatcttgaaagttgcaaacaactt
gtcctcaatcaggcagtctcaattgagaataccagctatgtccaaaacaagattaatagc
acattaaacgatatatcagacttatccgaccgcatagccaacgccaaagactcgaaagag
tcacaggacttggctaacgcggtggcagccaaaagcgtacaattgaatgcattaaccagc
caatgggaaatgtcagtcaagcaggctgaacagcgtgccgcgatgttgactcaacagcgg
caaaaagcattcaatgaacaacaactcgtctccccgattcctgactttaatcattga

DBGET integrated database retrieval system