Pectobacterium parmentieri RNS 08-42-1A: A8F97_11175
Help
Entry
A8F97_11175 CDS
T04513
Name
(GenBank) ligand-gated channel
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppar02000
]
A8F97_11175
Transporters [BR:
ppar02000
]
Other transporters
Pores ion channels [TC:
1
]
A8F97_11175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
C8-3_MUC4
Motif
Other DBs
NCBI-ProteinID:
AOR59460
LinkDB
All DBs
Position
2463975..2466158
Genome browser
AA seq
727 aa
AA seq
DB search
MNKKATRWALFMLPAIYSGAINAATNDLSITHSSTSHSTTNSDEITVISAGRTEQNLWES
PVTMQVVDNEKLSKYTSDSIAEALRDIPGVDITDTALAGRKQIRIRGEEASRVLVLIDGQ
EVTYQRAGPNYSLGLLIDPSYIERIEVVKGPHSVLYGSQAIGGVINFITRKGGDKPLSGK
IKAVYDSATAGWQESGLAYGSIGNFDYRLSGSYSDQGNRSTPDGRLPDTHFRNSGQSAWL
GYRLGDHKFGLSLDSFKLSTQTYTDSDEYDSFSVRIPELERKKVGLFYDWQLGGEVLKNL
HLDAYQQNIKREFRNDLSQSGNPLRYNGMSLYQGKMAMSTGTDDKQTSRGLTLQADITPL
ADHTLIAGGQWLSDVVKQNAFSDVHADGFLSPVAPFPISVNPSSVSNSHWRQNSWALFAQ
DAWKITPDWTWTLGARQYWVESLSYGGQKTGTIRMNGMVMPNNSTFATKKENDSTLVTAS
SLRYSGFDNIQLRASFAQGYVYPTLTHKFYDTAAGGNTTYGNAALQAETSDNYEVGMRYK
DENWLLDSAVYHSRAKDYITTLNCAGNAICSGSTAEGSRYYANANRATTYGMEMYAEYLG
WTLSPYVNGNIIRRELELPTRSTYRTGEPTFTGKIGVKNITLFERMELESDLYFRAVSRA
KDETADTAVQHSGWATANLEFTSTFGSENQYQVTLALNNLLDKRYTTAHESIPASGFSTA
IGAAFSF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaggccacacgctgggcactctttatgctgcctgctatttatagcggtgca
attaatgcagccacaaacgatttatccataacacattcatccaccagccattcaacgaca
aacagtgatgaaataaccgttattagcgcagggagaacggaacagaatttatgggaaagt
cccgtcactatgcaggttgtcgataatgaaaagctgagtaaatataccagcgattctatt
gccgaagcgctacgtgatattcccggcgtcgatattactgataccgcattagcgggtcgt
aaacaaatacgtattcgcggggaagaagcctcacgcgtattagtgttaattgacggacag
gaagtcacttatcaacgtgcggggcccaattacagcctcggattattaattgatccttct
tatatcgagcgcatcgaagtggtaaaaggcccgcattcggtattatatggttcacaggct
atcggcggcgtcattaactttataacccgcaaaggcggagacaagccgctgagtggcaaa
atcaaagccgtttacgacagcgccaccgctggctggcaggaatccggcttagcctacggg
tccatcggcaactttgactaccgcctcagcggcagctatagcgaccaaggcaaccgcagc
acgccggatggccgtctgccggatacccattttcgtaacagcggccagtcagcttggctc
ggctatcgtctgggcgatcataagttcggcctgtcgctggacagcttcaaactcagtacg
cagacctataccgattcggatgaatacgacagttttagcgtgcgaattcctgaattggaa
agaaagaaggtcggcctattttatgactggcagctcggcggcgaagtgctgaaaaatctg
catctggacgcctaccagcaaaatattaagcgtgagttccgtaacgatttatcgcagagc
ggtaacccgctgcgttataacggcatgtcgctttatcagggcaaaatggcgatgagtaca
ggaaccgacgacaagcagaccagtcgagggttgaccttacaggcggatatcacgccatta
gccgatcatacgctgattgcagggggacagtggctctccgatgtggtgaagcaaaacgcc
ttctccgatgttcatgcagacggttttctctctcctgtcgcacctttccctatctcggtt
aaccccagttcggtatccaacagccactggcggcaaaatagctgggcactgttcgcacag
gatgcatggaaaataacgccagactggacgtggacgctaggcgcgcgccagtattgggtt
gagtcactctcatacggcggacaaaagacaggcacaataagaatgaacggtatggtgatg
ccgaacaacagcacgttcgccacgaagaaggaaaatgacagtaccttagtcaccgccagc
agtttgcgctattccggctttgacaatatccaactgcgcgcctcctttgcccaaggttat
gtctacccgaccctgacgcataaattttacgacacggcggcgggcgggaataccacttat
ggtaacgccgctctacaagcggaaacgtcggataattatgaggtcggcatgcgctataaa
gatgagaactggctgctagatagcgccgtttatcattcacgcgctaaagattacatcacc
acgcttaactgcgcgggtaacgccatctgttccggcagtacggctgaaggtagccgttac
tacgctaatgccaatcgtgcgaccacatacgggatggaaatgtatgcggaatacctcggc
tggacgctgtctccttacgttaacggtaacatcatccgccgtgagctggaactgccgact
cgcagcacctatcgcaccggtgaacccacctttactggcaagatcggggtcaaaaacatc
acgttgttcgagcgaatggagctggaatcagatctctacttccgggcagtctcacgagcg
aaggatgaaacagcagataccgccgtccagcatagcggttgggcaacggccaatctggaa
ttcaccagtaccttcggcagcgagaatcagtatcaagtcacgctggcattgaacaacctg
ctggataaacgttacaccaccgcgcacgaaagcattccggcatccggtttcagcaccgcg
attggcgcggcgttctcattctga
DBGET
integrated database retrieval system
